Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7865 | 23818;23819;23820 | chr2:178720049;178720048;178720047 | chr2:179584776;179584775;179584774 |
N2AB | 7548 | 22867;22868;22869 | chr2:178720049;178720048;178720047 | chr2:179584776;179584775;179584774 |
N2A | 6621 | 20086;20087;20088 | chr2:178720049;178720048;178720047 | chr2:179584776;179584775;179584774 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs746952741 | -0.185 | 0.226 | N | 0.351 | 0.172 | 0.343560092441 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
K/R | rs746952741 | -0.185 | 0.226 | N | 0.351 | 0.172 | 0.343560092441 | gnomAD-4.0.0 | 2.7373E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59827E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6203 | likely_pathogenic | 0.606 | pathogenic | -0.508 | Destabilizing | 0.998 | D | 0.654 | neutral | None | None | None | None | N |
K/C | 0.8697 | likely_pathogenic | 0.861 | pathogenic | -0.589 | Destabilizing | 1.0 | D | 0.728 | prob.delet. | None | None | None | None | N |
K/D | 0.7554 | likely_pathogenic | 0.754 | pathogenic | 0.297 | Stabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
K/E | 0.2917 | likely_benign | 0.3008 | benign | 0.38 | Stabilizing | 0.985 | D | 0.608 | neutral | N | 0.49044213 | None | None | N |
K/F | 0.8444 | likely_pathogenic | 0.8349 | pathogenic | -0.379 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
K/G | 0.7429 | likely_pathogenic | 0.7238 | pathogenic | -0.827 | Destabilizing | 1.0 | D | 0.678 | prob.neutral | None | None | None | None | N |
K/H | 0.3963 | ambiguous | 0.385 | ambiguous | -1.123 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
K/I | 0.4358 | ambiguous | 0.4112 | ambiguous | 0.292 | Stabilizing | 0.993 | D | 0.735 | prob.delet. | D | 0.523170624 | None | None | N |
K/L | 0.4921 | ambiguous | 0.4859 | ambiguous | 0.292 | Stabilizing | 0.984 | D | 0.678 | prob.neutral | None | None | None | None | N |
K/M | 0.3385 | likely_benign | 0.3317 | benign | 0.187 | Stabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
K/N | 0.5196 | ambiguous | 0.5152 | ambiguous | -0.184 | Destabilizing | 0.999 | D | 0.699 | prob.neutral | D | 0.532867543 | None | None | N |
K/P | 0.8749 | likely_pathogenic | 0.8627 | pathogenic | 0.055 | Stabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
K/Q | 0.2001 | likely_benign | 0.1965 | benign | -0.32 | Destabilizing | 0.989 | D | 0.693 | prob.neutral | N | 0.485910274 | None | None | N |
K/R | 0.0916 | likely_benign | 0.0894 | benign | -0.351 | Destabilizing | 0.226 | N | 0.351 | neutral | N | 0.508721247 | None | None | N |
K/S | 0.6145 | likely_pathogenic | 0.6049 | pathogenic | -0.934 | Destabilizing | 0.998 | D | 0.639 | neutral | None | None | None | None | N |
K/T | 0.2828 | likely_benign | 0.2812 | benign | -0.652 | Destabilizing | 0.998 | D | 0.743 | deleterious | N | 0.486999181 | None | None | N |
K/V | 0.4725 | ambiguous | 0.4488 | ambiguous | 0.055 | Stabilizing | 0.988 | D | 0.739 | prob.delet. | None | None | None | None | N |
K/W | 0.8254 | likely_pathogenic | 0.8284 | pathogenic | -0.217 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
K/Y | 0.704 | likely_pathogenic | 0.6915 | pathogenic | 0.095 | Stabilizing | 0.997 | D | 0.736 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.