Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7870 | 23833;23834;23835 | chr2:178720034;178720033;178720032 | chr2:179584761;179584760;179584759 |
N2AB | 7553 | 22882;22883;22884 | chr2:178720034;178720033;178720032 | chr2:179584761;179584760;179584759 |
N2A | 6626 | 20101;20102;20103 | chr2:178720034;178720033;178720032 | chr2:179584761;179584760;179584759 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/N | None | None | 0.995 | N | 0.819 | 0.634 | 0.86173524933 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.7009 | likely_pathogenic | 0.5658 | pathogenic | -2.839 | Highly Destabilizing | 0.002 | N | 0.461 | neutral | None | None | None | None | N |
I/C | 0.9417 | likely_pathogenic | 0.911 | pathogenic | -2.048 | Highly Destabilizing | 0.905 | D | 0.775 | deleterious | None | None | None | None | N |
I/D | 0.9986 | likely_pathogenic | 0.9969 | pathogenic | -3.561 | Highly Destabilizing | 0.997 | D | 0.811 | deleterious | None | None | None | None | N |
I/E | 0.9949 | likely_pathogenic | 0.9907 | pathogenic | -3.289 | Highly Destabilizing | 0.968 | D | 0.779 | deleterious | None | None | None | None | N |
I/F | 0.7865 | likely_pathogenic | 0.7281 | pathogenic | -1.6 | Destabilizing | 0.783 | D | 0.709 | prob.delet. | N | 0.50419234 | None | None | N |
I/G | 0.9711 | likely_pathogenic | 0.9415 | pathogenic | -3.386 | Highly Destabilizing | 0.4 | N | 0.739 | prob.delet. | None | None | None | None | N |
I/H | 0.997 | likely_pathogenic | 0.9943 | pathogenic | -2.934 | Highly Destabilizing | 0.978 | D | 0.827 | deleterious | None | None | None | None | N |
I/K | 0.9963 | likely_pathogenic | 0.9927 | pathogenic | -2.218 | Highly Destabilizing | 0.548 | D | 0.777 | deleterious | None | None | None | None | N |
I/L | 0.3511 | ambiguous | 0.2691 | benign | -1.207 | Destabilizing | None | N | 0.293 | neutral | D | 0.528595087 | None | None | N |
I/M | 0.3227 | likely_benign | 0.25 | benign | -1.316 | Destabilizing | 0.064 | N | 0.675 | prob.neutral | N | 0.50419234 | None | None | N |
I/N | 0.9767 | likely_pathogenic | 0.9534 | pathogenic | -2.754 | Highly Destabilizing | 0.995 | D | 0.819 | deleterious | N | 0.515802135 | None | None | N |
I/P | 0.9975 | likely_pathogenic | 0.9952 | pathogenic | -1.74 | Destabilizing | 0.997 | D | 0.81 | deleterious | None | None | None | None | N |
I/Q | 0.9922 | likely_pathogenic | 0.9852 | pathogenic | -2.516 | Highly Destabilizing | 0.992 | D | 0.833 | deleterious | None | None | None | None | N |
I/R | 0.9929 | likely_pathogenic | 0.9869 | pathogenic | -2.014 | Highly Destabilizing | 0.991 | D | 0.82 | deleterious | None | None | None | None | N |
I/S | 0.9041 | likely_pathogenic | 0.8295 | pathogenic | -3.318 | Highly Destabilizing | 0.335 | N | 0.7 | prob.neutral | N | 0.48854362 | None | None | N |
I/T | 0.867 | likely_pathogenic | 0.7277 | pathogenic | -2.912 | Highly Destabilizing | 0.004 | N | 0.501 | neutral | N | 0.492164471 | None | None | N |
I/V | 0.1056 | likely_benign | 0.092 | benign | -1.74 | Destabilizing | None | N | 0.259 | neutral | N | 0.427886588 | None | None | N |
I/W | 0.9964 | likely_pathogenic | 0.994 | pathogenic | -2.081 | Highly Destabilizing | 0.994 | D | 0.817 | deleterious | None | None | None | None | N |
I/Y | 0.9838 | likely_pathogenic | 0.9767 | pathogenic | -1.864 | Destabilizing | 0.307 | N | 0.783 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.