Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7873 | 23842;23843;23844 | chr2:178720025;178720024;178720023 | chr2:179584752;179584751;179584750 |
N2AB | 7556 | 22891;22892;22893 | chr2:178720025;178720024;178720023 | chr2:179584752;179584751;179584750 |
N2A | 6629 | 20110;20111;20112 | chr2:178720025;178720024;178720023 | chr2:179584752;179584751;179584750 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | None | None | 0.801 | D | 0.382 | 0.259 | 0.365892764245 | gnomAD-4.0.0 | 1.59325E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.4339E-05 | 0 |
D/N | rs753929851 | 0.579 | 0.233 | N | 0.375 | 0.208 | 0.33110744837 | gnomAD-2.1.1 | 7.17E-06 | None | None | None | None | I | None | 8.3E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
D/N | rs753929851 | 0.579 | 0.233 | N | 0.375 | 0.208 | 0.33110744837 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | I | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
D/N | rs753929851 | 0.579 | 0.233 | N | 0.375 | 0.208 | 0.33110744837 | gnomAD-4.0.0 | 4.34016E-06 | None | None | None | None | I | None | 8.01475E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.60231E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.3918 | ambiguous | 0.2892 | benign | 0.047 | Stabilizing | 0.801 | D | 0.428 | neutral | N | 0.498482824 | None | None | I |
D/C | 0.9336 | likely_pathogenic | 0.8883 | pathogenic | 0.082 | Stabilizing | 0.998 | D | 0.489 | neutral | None | None | None | None | I |
D/E | 0.2139 | likely_benign | 0.1931 | benign | -0.294 | Destabilizing | 0.005 | N | 0.232 | neutral | N | 0.460577796 | None | None | I |
D/F | 0.8806 | likely_pathogenic | 0.8044 | pathogenic | -0.155 | Destabilizing | 0.991 | D | 0.435 | neutral | None | None | None | None | I |
D/G | 0.4976 | ambiguous | 0.3643 | ambiguous | -0.051 | Destabilizing | 0.801 | D | 0.382 | neutral | D | 0.532307396 | None | None | I |
D/H | 0.6445 | likely_pathogenic | 0.5365 | ambiguous | 0.324 | Stabilizing | 0.986 | D | 0.401 | neutral | N | 0.495834547 | None | None | I |
D/I | 0.6634 | likely_pathogenic | 0.5653 | pathogenic | 0.233 | Stabilizing | 0.974 | D | 0.437 | neutral | None | None | None | None | I |
D/K | 0.7185 | likely_pathogenic | 0.6622 | pathogenic | 0.526 | Stabilizing | 0.728 | D | 0.401 | neutral | None | None | None | None | I |
D/L | 0.7184 | likely_pathogenic | 0.6296 | pathogenic | 0.233 | Stabilizing | 0.949 | D | 0.406 | neutral | None | None | None | None | I |
D/M | 0.8621 | likely_pathogenic | 0.7988 | pathogenic | 0.159 | Stabilizing | 0.998 | D | 0.443 | neutral | None | None | None | None | I |
D/N | 0.2245 | likely_benign | 0.1727 | benign | 0.396 | Stabilizing | 0.233 | N | 0.375 | neutral | N | 0.487667793 | None | None | I |
D/P | 0.8958 | likely_pathogenic | 0.8483 | pathogenic | 0.19 | Stabilizing | 0.974 | D | 0.391 | neutral | None | None | None | None | I |
D/Q | 0.6387 | likely_pathogenic | 0.5629 | ambiguous | 0.373 | Stabilizing | 0.325 | N | 0.365 | neutral | None | None | None | None | I |
D/R | 0.7618 | likely_pathogenic | 0.6972 | pathogenic | 0.647 | Stabilizing | 0.949 | D | 0.419 | neutral | None | None | None | None | I |
D/S | 0.2926 | likely_benign | 0.2163 | benign | 0.295 | Stabilizing | 0.842 | D | 0.402 | neutral | None | None | None | None | I |
D/T | 0.5118 | ambiguous | 0.4148 | ambiguous | 0.372 | Stabilizing | 0.842 | D | 0.419 | neutral | None | None | None | None | I |
D/V | 0.4559 | ambiguous | 0.3638 | ambiguous | 0.19 | Stabilizing | 0.966 | D | 0.414 | neutral | N | 0.520975681 | None | None | I |
D/W | 0.9798 | likely_pathogenic | 0.9667 | pathogenic | -0.15 | Destabilizing | 0.998 | D | 0.543 | neutral | None | None | None | None | I |
D/Y | 0.6003 | likely_pathogenic | 0.4781 | ambiguous | 0.062 | Stabilizing | 0.996 | D | 0.435 | neutral | N | 0.496088037 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.