Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7874 | 23845;23846;23847 | chr2:178720022;178720021;178720020 | chr2:179584749;179584748;179584747 |
N2AB | 7557 | 22894;22895;22896 | chr2:178720022;178720021;178720020 | chr2:179584749;179584748;179584747 |
N2A | 6630 | 20113;20114;20115 | chr2:178720022;178720021;178720020 | chr2:179584749;179584748;179584747 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | None | None | 0.143 | N | 0.409 | 0.172 | 0.362960570912 | gnomAD-4.0.0 | 3.18752E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.77793E-05 | None | 0 | 0 | 2.86282E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.8089 | likely_pathogenic | 0.7685 | pathogenic | -0.855 | Destabilizing | 0.999 | D | 0.648 | neutral | None | None | None | None | I |
A/D | 0.9385 | likely_pathogenic | 0.8913 | pathogenic | -0.658 | Destabilizing | 0.983 | D | 0.675 | prob.neutral | D | 0.540048909 | None | None | I |
A/E | 0.9002 | likely_pathogenic | 0.8533 | pathogenic | -0.811 | Destabilizing | 0.991 | D | 0.583 | neutral | None | None | None | None | I |
A/F | 0.6945 | likely_pathogenic | 0.6017 | pathogenic | -0.96 | Destabilizing | 0.998 | D | 0.696 | prob.neutral | None | None | None | None | I |
A/G | 0.3309 | likely_benign | 0.1991 | benign | -0.241 | Destabilizing | 0.616 | D | 0.533 | neutral | N | 0.50609167 | None | None | I |
A/H | 0.9251 | likely_pathogenic | 0.8856 | pathogenic | -0.214 | Destabilizing | 1.0 | D | 0.694 | prob.neutral | None | None | None | None | I |
A/I | 0.6907 | likely_pathogenic | 0.6474 | pathogenic | -0.455 | Destabilizing | 0.993 | D | 0.581 | neutral | None | None | None | None | I |
A/K | 0.9769 | likely_pathogenic | 0.9618 | pathogenic | -0.561 | Destabilizing | 0.997 | D | 0.585 | neutral | None | None | None | None | I |
A/L | 0.6312 | likely_pathogenic | 0.559 | ambiguous | -0.455 | Destabilizing | 0.976 | D | 0.551 | neutral | None | None | None | None | I |
A/M | 0.6626 | likely_pathogenic | 0.5864 | pathogenic | -0.576 | Destabilizing | 1.0 | D | 0.632 | neutral | None | None | None | None | I |
A/N | 0.8449 | likely_pathogenic | 0.7494 | pathogenic | -0.274 | Destabilizing | 0.9 | D | 0.683 | prob.neutral | None | None | None | None | I |
A/P | 0.9799 | likely_pathogenic | 0.9688 | pathogenic | -0.363 | Destabilizing | 0.992 | D | 0.612 | neutral | D | 0.551405214 | None | None | I |
A/Q | 0.8898 | likely_pathogenic | 0.8474 | pathogenic | -0.553 | Destabilizing | 0.998 | D | 0.634 | neutral | None | None | None | None | I |
A/R | 0.9243 | likely_pathogenic | 0.8975 | pathogenic | -0.104 | Destabilizing | 0.998 | D | 0.629 | neutral | None | None | None | None | I |
A/S | 0.1902 | likely_benign | 0.1507 | benign | -0.44 | Destabilizing | 0.099 | N | 0.405 | neutral | N | 0.512826393 | None | None | I |
A/T | 0.3604 | ambiguous | 0.3005 | benign | -0.525 | Destabilizing | 0.844 | D | 0.579 | neutral | D | 0.52539724 | None | None | I |
A/V | 0.347 | ambiguous | 0.3135 | benign | -0.363 | Destabilizing | 0.143 | N | 0.409 | neutral | N | 0.491538209 | None | None | I |
A/W | 0.9708 | likely_pathogenic | 0.9541 | pathogenic | -1.046 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | I |
A/Y | 0.8892 | likely_pathogenic | 0.8332 | pathogenic | -0.74 | Destabilizing | 0.999 | D | 0.698 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.