Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7876 | 23851;23852;23853 | chr2:178720016;178720015;178720014 | chr2:179584743;179584742;179584741 |
N2AB | 7559 | 22900;22901;22902 | chr2:178720016;178720015;178720014 | chr2:179584743;179584742;179584741 |
N2A | 6632 | 20119;20120;20121 | chr2:178720016;178720015;178720014 | chr2:179584743;179584742;179584741 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/I | None | None | None | N | 0.137 | 0.193 | 0.53104733087 | gnomAD-4.0.0 | 3.19068E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 2.41663E-04 | 2.86587E-06 | 0 | 0 |
M/V | None | None | 0.005 | N | 0.188 | 0.106 | 0.52633505579 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.3414 | ambiguous | 0.3518 | ambiguous | -1.068 | Destabilizing | 0.007 | N | 0.272 | neutral | None | None | None | None | I |
M/C | 0.8174 | likely_pathogenic | 0.7834 | pathogenic | -0.839 | Destabilizing | 0.356 | N | 0.49 | neutral | None | None | None | None | I |
M/D | 0.7711 | likely_pathogenic | 0.7778 | pathogenic | -0.216 | Destabilizing | 0.031 | N | 0.566 | neutral | None | None | None | None | I |
M/E | 0.3952 | ambiguous | 0.3961 | ambiguous | -0.243 | Destabilizing | 0.016 | N | 0.481 | neutral | None | None | None | None | I |
M/F | 0.3026 | likely_benign | 0.2895 | benign | -0.399 | Destabilizing | 0.136 | N | 0.432 | neutral | None | None | None | None | I |
M/G | 0.5418 | ambiguous | 0.5264 | ambiguous | -1.297 | Destabilizing | 0.031 | N | 0.571 | neutral | None | None | None | None | I |
M/H | 0.5049 | ambiguous | 0.5246 | ambiguous | -0.345 | Destabilizing | 0.356 | N | 0.526 | neutral | None | None | None | None | I |
M/I | 0.277 | likely_benign | 0.2637 | benign | -0.528 | Destabilizing | None | N | 0.137 | neutral | N | 0.49630931 | None | None | I |
M/K | 0.218 | likely_benign | 0.2311 | benign | -0.126 | Destabilizing | None | N | 0.173 | neutral | N | 0.428676022 | None | None | I |
M/L | 0.1331 | likely_benign | 0.1364 | benign | -0.528 | Destabilizing | 0.002 | N | 0.203 | neutral | N | 0.511854766 | None | None | I |
M/N | 0.4014 | ambiguous | 0.4024 | ambiguous | 0.03 | Stabilizing | 0.072 | N | 0.559 | neutral | None | None | None | None | I |
M/P | 0.8955 | likely_pathogenic | 0.8994 | pathogenic | -0.68 | Destabilizing | 0.136 | N | 0.564 | neutral | None | None | None | None | I |
M/Q | 0.2191 | likely_benign | 0.2262 | benign | -0.138 | Destabilizing | 0.001 | N | 0.13 | neutral | None | None | None | None | I |
M/R | 0.2281 | likely_benign | 0.2467 | benign | 0.458 | Stabilizing | 0.012 | N | 0.471 | neutral | N | 0.500117619 | None | None | I |
M/S | 0.293 | likely_benign | 0.2895 | benign | -0.465 | Destabilizing | 0.016 | N | 0.375 | neutral | None | None | None | None | I |
M/T | 0.1811 | likely_benign | 0.1742 | benign | -0.392 | Destabilizing | None | N | 0.166 | neutral | N | 0.434047343 | None | None | I |
M/V | 0.0986 | likely_benign | 0.0914 | benign | -0.68 | Destabilizing | 0.005 | N | 0.188 | neutral | N | 0.484110804 | None | None | I |
M/W | 0.5993 | likely_pathogenic | 0.6051 | pathogenic | -0.32 | Destabilizing | 0.864 | D | 0.484 | neutral | None | None | None | None | I |
M/Y | 0.5454 | ambiguous | 0.5605 | ambiguous | -0.281 | Destabilizing | 0.136 | N | 0.512 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.