Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7880 | 23863;23864;23865 | chr2:178720004;178720003;178720002 | chr2:179584731;179584730;179584729 |
N2AB | 7563 | 22912;22913;22914 | chr2:178720004;178720003;178720002 | chr2:179584731;179584730;179584729 |
N2A | 6636 | 20131;20132;20133 | chr2:178720004;178720003;178720002 | chr2:179584731;179584730;179584729 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/T | rs1158110251 | -0.408 | 0.625 | N | 0.52 | 0.184 | 0.225215365344 | gnomAD-2.1.1 | 4.07E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.62E-05 | None | 0 | None | 0 | 0 | 0 |
S/T | rs1158110251 | -0.408 | 0.625 | N | 0.52 | 0.184 | 0.225215365344 | gnomAD-4.0.0 | 3.19568E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.56204E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0882 | likely_benign | 0.0919 | benign | -0.603 | Destabilizing | 0.005 | N | 0.189 | neutral | D | 0.528403086 | None | None | N |
S/C | 0.1747 | likely_benign | 0.1687 | benign | -0.428 | Destabilizing | 0.991 | D | 0.602 | neutral | N | 0.518639745 | None | None | N |
S/D | 0.4768 | ambiguous | 0.5445 | ambiguous | -0.109 | Destabilizing | 0.915 | D | 0.571 | neutral | None | None | None | None | N |
S/E | 0.5345 | ambiguous | 0.597 | pathogenic | -0.138 | Destabilizing | 0.842 | D | 0.55 | neutral | None | None | None | None | N |
S/F | 0.1213 | likely_benign | 0.1172 | benign | -0.812 | Destabilizing | 0.005 | N | 0.44 | neutral | N | 0.483806947 | None | None | N |
S/G | 0.1339 | likely_benign | 0.14 | benign | -0.829 | Destabilizing | 0.525 | D | 0.525 | neutral | None | None | None | None | N |
S/H | 0.344 | ambiguous | 0.3679 | ambiguous | -1.305 | Destabilizing | 0.991 | D | 0.605 | neutral | None | None | None | None | N |
S/I | 0.1709 | likely_benign | 0.1696 | benign | -0.119 | Destabilizing | 0.728 | D | 0.653 | neutral | None | None | None | None | N |
S/K | 0.73 | likely_pathogenic | 0.7793 | pathogenic | -0.729 | Destabilizing | 0.842 | D | 0.536 | neutral | None | None | None | None | N |
S/L | 0.1008 | likely_benign | 0.0999 | benign | -0.119 | Destabilizing | 0.007 | N | 0.453 | neutral | None | None | None | None | N |
S/M | 0.2029 | likely_benign | 0.1848 | benign | 0.129 | Stabilizing | 0.949 | D | 0.617 | neutral | None | None | None | None | N |
S/N | 0.1589 | likely_benign | 0.172 | benign | -0.569 | Destabilizing | 0.915 | D | 0.588 | neutral | None | None | None | None | N |
S/P | 0.4819 | ambiguous | 0.5406 | ambiguous | -0.247 | Destabilizing | 0.966 | D | 0.629 | neutral | N | 0.503155609 | None | None | N |
S/Q | 0.5288 | ambiguous | 0.5615 | ambiguous | -0.754 | Destabilizing | 0.974 | D | 0.584 | neutral | None | None | None | None | N |
S/R | 0.6014 | likely_pathogenic | 0.6761 | pathogenic | -0.577 | Destabilizing | 0.974 | D | 0.63 | neutral | None | None | None | None | N |
S/T | 0.0909 | likely_benign | 0.0911 | benign | -0.622 | Destabilizing | 0.625 | D | 0.52 | neutral | N | 0.472048371 | None | None | N |
S/V | 0.1723 | likely_benign | 0.169 | benign | -0.247 | Destabilizing | 0.525 | D | 0.603 | neutral | None | None | None | None | N |
S/W | 0.2842 | likely_benign | 0.2988 | benign | -0.782 | Destabilizing | 0.998 | D | 0.674 | neutral | None | None | None | None | N |
S/Y | 0.1461 | likely_benign | 0.1472 | benign | -0.532 | Destabilizing | 0.669 | D | 0.699 | prob.neutral | N | 0.488925695 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.