Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7884 | 23875;23876;23877 | chr2:178719992;178719991;178719990 | chr2:179584719;179584718;179584717 |
N2AB | 7567 | 22924;22925;22926 | chr2:178719992;178719991;178719990 | chr2:179584719;179584718;179584717 |
N2A | 6640 | 20143;20144;20145 | chr2:178719992;178719991;178719990 | chr2:179584719;179584718;179584717 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1180482059 | -0.397 | 0.193 | N | 0.409 | 0.196 | 0.412064437402 | gnomAD-2.1.1 | 4.13E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.38E-05 | None | 0 | 0 | 0 |
T/I | rs1180482059 | -0.397 | 0.193 | N | 0.409 | 0.196 | 0.412064437402 | gnomAD-4.0.0 | 2.74767E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.02053E-07 | 3.51725E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0805 | likely_benign | 0.0812 | benign | -0.788 | Destabilizing | 0.09 | N | 0.324 | neutral | N | 0.519071527 | None | None | N |
T/C | 0.4739 | ambiguous | 0.4283 | ambiguous | -0.408 | Destabilizing | 0.944 | D | 0.421 | neutral | None | None | None | None | N |
T/D | 0.3144 | likely_benign | 0.3058 | benign | 0.321 | Stabilizing | 0.241 | N | 0.417 | neutral | None | None | None | None | N |
T/E | 0.2429 | likely_benign | 0.2496 | benign | 0.283 | Stabilizing | 0.241 | N | 0.407 | neutral | None | None | None | None | N |
T/F | 0.2216 | likely_benign | 0.2059 | benign | -1.091 | Destabilizing | 0.818 | D | 0.503 | neutral | None | None | None | None | N |
T/G | 0.2642 | likely_benign | 0.2433 | benign | -0.974 | Destabilizing | 0.116 | N | 0.457 | neutral | None | None | None | None | N |
T/H | 0.1725 | likely_benign | 0.1672 | benign | -1.311 | Destabilizing | 0.818 | D | 0.468 | neutral | None | None | None | None | N |
T/I | 0.1906 | likely_benign | 0.1771 | benign | -0.398 | Destabilizing | 0.193 | N | 0.409 | neutral | N | 0.519034241 | None | None | N |
T/K | 0.1612 | likely_benign | 0.1722 | benign | -0.402 | Destabilizing | 0.241 | N | 0.396 | neutral | None | None | None | None | N |
T/L | 0.1037 | likely_benign | 0.0994 | benign | -0.398 | Destabilizing | 0.116 | N | 0.409 | neutral | None | None | None | None | N |
T/M | 0.0911 | likely_benign | 0.0918 | benign | -0.035 | Destabilizing | 0.818 | D | 0.439 | neutral | None | None | None | None | N |
T/N | 0.0986 | likely_benign | 0.0925 | benign | -0.202 | Destabilizing | 0.006 | N | 0.285 | neutral | N | 0.494175869 | None | None | N |
T/P | 0.4489 | ambiguous | 0.4338 | ambiguous | -0.499 | Destabilizing | 0.773 | D | 0.458 | neutral | D | 0.527109214 | None | None | N |
T/Q | 0.1699 | likely_benign | 0.1776 | benign | -0.46 | Destabilizing | 0.019 | N | 0.271 | neutral | None | None | None | None | N |
T/R | 0.1262 | likely_benign | 0.1306 | benign | -0.201 | Destabilizing | 0.241 | N | 0.442 | neutral | None | None | None | None | N |
T/S | 0.0925 | likely_benign | 0.0853 | benign | -0.57 | Destabilizing | 0.001 | N | 0.087 | neutral | N | 0.451366454 | None | None | N |
T/V | 0.1602 | likely_benign | 0.1469 | benign | -0.499 | Destabilizing | 0.008 | N | 0.178 | neutral | None | None | None | None | N |
T/W | 0.517 | ambiguous | 0.4789 | ambiguous | -0.965 | Destabilizing | 0.981 | D | 0.534 | neutral | None | None | None | None | N |
T/Y | 0.2211 | likely_benign | 0.2051 | benign | -0.725 | Destabilizing | 0.818 | D | 0.504 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.