Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7895 | 23908;23909;23910 | chr2:178719809;178719808;178719807 | chr2:179584536;179584535;179584534 |
N2AB | 7578 | 22957;22958;22959 | chr2:178719809;178719808;178719807 | chr2:179584536;179584535;179584534 |
N2A | 6651 | 20176;20177;20178 | chr2:178719809;178719808;178719807 | chr2:179584536;179584535;179584534 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 0.026 | N | 0.579 | 0.281 | 0.39798585902 | gnomAD-4.0.0 | 3.19471E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.87134E-06 | 1.43794E-05 | 0 |
P/S | None | None | 0.811 | N | 0.697 | 0.441 | 0.317084106153 | gnomAD-4.0.0 | 6.85389E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00823E-07 | 0 | 0 |
P/T | None | None | 0.211 | N | 0.492 | 0.376 | 0.302793454619 | gnomAD-4.0.0 | 1.02808E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.35123E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1284 | likely_benign | 0.1128 | benign | -1.601 | Destabilizing | 0.811 | D | 0.631 | neutral | N | 0.516518719 | None | None | N |
P/C | 0.8482 | likely_pathogenic | 0.8206 | pathogenic | -0.948 | Destabilizing | 0.999 | D | 0.841 | deleterious | None | None | None | None | N |
P/D | 0.9693 | likely_pathogenic | 0.9612 | pathogenic | -1.779 | Destabilizing | 0.976 | D | 0.742 | deleterious | None | None | None | None | N |
P/E | 0.9076 | likely_pathogenic | 0.8868 | pathogenic | -1.751 | Destabilizing | 0.976 | D | 0.748 | deleterious | None | None | None | None | N |
P/F | 0.9418 | likely_pathogenic | 0.925 | pathogenic | -1.196 | Destabilizing | 0.976 | D | 0.859 | deleterious | None | None | None | None | N |
P/G | 0.6963 | likely_pathogenic | 0.6501 | pathogenic | -1.948 | Destabilizing | 0.976 | D | 0.755 | deleterious | None | None | None | None | N |
P/H | 0.9027 | likely_pathogenic | 0.886 | pathogenic | -1.672 | Destabilizing | 0.999 | D | 0.776 | deleterious | N | 0.51553024 | None | None | N |
P/I | 0.715 | likely_pathogenic | 0.6584 | pathogenic | -0.727 | Destabilizing | 0.952 | D | 0.793 | deleterious | None | None | None | None | N |
P/K | 0.9533 | likely_pathogenic | 0.9416 | pathogenic | -1.513 | Destabilizing | 0.976 | D | 0.757 | deleterious | None | None | None | None | N |
P/L | 0.3274 | likely_benign | 0.2933 | benign | -0.727 | Destabilizing | 0.026 | N | 0.579 | neutral | N | 0.499871611 | None | None | N |
P/M | 0.6542 | likely_pathogenic | 0.5978 | pathogenic | -0.505 | Destabilizing | 0.976 | D | 0.788 | deleterious | None | None | None | None | N |
P/N | 0.9277 | likely_pathogenic | 0.9071 | pathogenic | -1.298 | Destabilizing | 0.976 | D | 0.767 | deleterious | None | None | None | None | N |
P/Q | 0.821 | likely_pathogenic | 0.7893 | pathogenic | -1.426 | Destabilizing | 0.988 | D | 0.737 | prob.delet. | None | None | None | None | N |
P/R | 0.895 | likely_pathogenic | 0.8801 | pathogenic | -1.028 | Destabilizing | 0.984 | D | 0.765 | deleterious | N | 0.515023261 | None | None | N |
P/S | 0.5283 | ambiguous | 0.4803 | ambiguous | -1.741 | Destabilizing | 0.811 | D | 0.697 | prob.neutral | N | 0.490082151 | None | None | N |
P/T | 0.3161 | likely_benign | 0.2763 | benign | -1.609 | Destabilizing | 0.211 | N | 0.492 | neutral | N | 0.49205716 | None | None | N |
P/V | 0.4905 | ambiguous | 0.4341 | ambiguous | -0.985 | Destabilizing | 0.851 | D | 0.687 | prob.neutral | None | None | None | None | N |
P/W | 0.9808 | likely_pathogenic | 0.9762 | pathogenic | -1.494 | Destabilizing | 0.999 | D | 0.803 | deleterious | None | None | None | None | N |
P/Y | 0.9576 | likely_pathogenic | 0.945 | pathogenic | -1.191 | Destabilizing | 0.996 | D | 0.862 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.