Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7896 | 23911;23912;23913 | chr2:178719806;178719805;178719804 | chr2:179584533;179584532;179584531 |
N2AB | 7579 | 22960;22961;22962 | chr2:178719806;178719805;178719804 | chr2:179584533;179584532;179584531 |
N2A | 6652 | 20179;20180;20181 | chr2:178719806;178719805;178719804 | chr2:179584533;179584532;179584531 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs786205400 | 0.064 | 0.996 | N | 0.567 | 0.291 | 0.472344434578 | gnomAD-2.1.1 | 2.03E-05 | None | None | None | None | N | None | 6.48E-05 | 2.92E-05 | None | 0 | 1.11719E-04 | None | 0 | None | 0 | 9.01E-06 | 0 |
E/K | rs786205400 | 0.064 | 0.996 | N | 0.567 | 0.291 | 0.472344434578 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
E/K | rs786205400 | 0.064 | 0.996 | N | 0.567 | 0.291 | 0.472344434578 | gnomAD-4.0.0 | 9.92933E-06 | None | None | None | None | N | None | 1.3369E-05 | 1.67051E-05 | None | 0 | 4.46409E-05 | None | 0 | 1.64853E-04 | 9.33567E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1358 | likely_benign | 0.1222 | benign | -0.142 | Destabilizing | 0.956 | D | 0.623 | neutral | N | 0.482921306 | None | None | N |
E/C | 0.8394 | likely_pathogenic | 0.8051 | pathogenic | -0.355 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | N |
E/D | 0.1749 | likely_benign | 0.1571 | benign | -0.284 | Destabilizing | 0.121 | N | 0.23 | neutral | N | 0.517108657 | None | None | N |
E/F | 0.6769 | likely_pathogenic | 0.6105 | pathogenic | -0.096 | Destabilizing | 0.999 | D | 0.714 | prob.delet. | None | None | None | None | N |
E/G | 0.1174 | likely_benign | 0.109 | benign | -0.287 | Destabilizing | 0.978 | D | 0.613 | neutral | D | 0.53665721 | None | None | N |
E/H | 0.4523 | ambiguous | 0.414 | ambiguous | 0.512 | Stabilizing | 1.0 | D | 0.605 | neutral | None | None | None | None | N |
E/I | 0.2908 | likely_benign | 0.2465 | benign | 0.195 | Stabilizing | 0.998 | D | 0.741 | deleterious | None | None | None | None | N |
E/K | 0.1084 | likely_benign | 0.1035 | benign | 0.204 | Stabilizing | 0.996 | D | 0.567 | neutral | N | 0.499442829 | None | None | N |
E/L | 0.3134 | likely_benign | 0.2642 | benign | 0.195 | Stabilizing | 0.998 | D | 0.699 | prob.neutral | None | None | None | None | N |
E/M | 0.3853 | ambiguous | 0.3315 | benign | -0.095 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | N |
E/N | 0.2827 | likely_benign | 0.241 | benign | -0.021 | Destabilizing | 0.983 | D | 0.595 | neutral | None | None | None | None | N |
E/P | 0.5951 | likely_pathogenic | 0.5457 | ambiguous | 0.101 | Stabilizing | 0.998 | D | 0.733 | prob.delet. | None | None | None | None | N |
E/Q | 0.1127 | likely_benign | 0.108 | benign | 0.002 | Stabilizing | 0.999 | D | 0.617 | neutral | D | 0.523245195 | None | None | N |
E/R | 0.1984 | likely_benign | 0.188 | benign | 0.547 | Stabilizing | 0.998 | D | 0.645 | neutral | None | None | None | None | N |
E/S | 0.1804 | likely_benign | 0.1597 | benign | -0.197 | Destabilizing | 0.693 | D | 0.298 | neutral | None | None | None | None | N |
E/T | 0.215 | likely_benign | 0.1834 | benign | -0.075 | Destabilizing | 0.967 | D | 0.659 | neutral | None | None | None | None | N |
E/V | 0.1723 | likely_benign | 0.1475 | benign | 0.101 | Stabilizing | 0.997 | D | 0.679 | prob.neutral | N | 0.52032232 | None | None | N |
E/W | 0.8848 | likely_pathogenic | 0.8521 | pathogenic | -0.017 | Destabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | N |
E/Y | 0.5936 | likely_pathogenic | 0.5421 | ambiguous | 0.128 | Stabilizing | 0.999 | D | 0.71 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.