Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC789623911;23912;23913 chr2:178719806;178719805;178719804chr2:179584533;179584532;179584531
N2AB757922960;22961;22962 chr2:178719806;178719805;178719804chr2:179584533;179584532;179584531
N2A665220179;20180;20181 chr2:178719806;178719805;178719804chr2:179584533;179584532;179584531
N2BNoneNone chr2:Nonechr2:None
Novex-1NoneNone chr2:Nonechr2:None
Novex-2NoneNone chr2:Nonechr2:None
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: E
  • RefSeq wild type transcript codon: GAA
  • RefSeq wild type template codon: CTT
  • Domain: Ig-64
  • Domain position: 8
  • Structural Position: 9
  • Q(SASA): 0.4033
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
E/K rs786205400 0.064 0.996 N 0.567 0.291 0.472344434578 gnomAD-2.1.1 2.03E-05 None None None None N None 6.48E-05 2.92E-05 None 0 1.11719E-04 None 0 None 0 9.01E-06 0
E/K rs786205400 0.064 0.996 N 0.567 0.291 0.472344434578 gnomAD-3.1.2 1.31E-05 None None None None N None 0 0 0 0 0 None 0 0 2.94E-05 0 0
E/K rs786205400 0.064 0.996 N 0.567 0.291 0.472344434578 gnomAD-4.0.0 9.92933E-06 None None None None N None 1.3369E-05 1.67051E-05 None 0 4.46409E-05 None 0 1.64853E-04 9.33567E-06 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
E/A 0.1358 likely_benign 0.1222 benign -0.142 Destabilizing 0.956 D 0.623 neutral N 0.482921306 None None N
E/C 0.8394 likely_pathogenic 0.8051 pathogenic -0.355 Destabilizing 1.0 D 0.693 prob.neutral None None None None N
E/D 0.1749 likely_benign 0.1571 benign -0.284 Destabilizing 0.121 N 0.23 neutral N 0.517108657 None None N
E/F 0.6769 likely_pathogenic 0.6105 pathogenic -0.096 Destabilizing 0.999 D 0.714 prob.delet. None None None None N
E/G 0.1174 likely_benign 0.109 benign -0.287 Destabilizing 0.978 D 0.613 neutral D 0.53665721 None None N
E/H 0.4523 ambiguous 0.414 ambiguous 0.512 Stabilizing 1.0 D 0.605 neutral None None None None N
E/I 0.2908 likely_benign 0.2465 benign 0.195 Stabilizing 0.998 D 0.741 deleterious None None None None N
E/K 0.1084 likely_benign 0.1035 benign 0.204 Stabilizing 0.996 D 0.567 neutral N 0.499442829 None None N
E/L 0.3134 likely_benign 0.2642 benign 0.195 Stabilizing 0.998 D 0.699 prob.neutral None None None None N
E/M 0.3853 ambiguous 0.3315 benign -0.095 Destabilizing 1.0 D 0.683 prob.neutral None None None None N
E/N 0.2827 likely_benign 0.241 benign -0.021 Destabilizing 0.983 D 0.595 neutral None None None None N
E/P 0.5951 likely_pathogenic 0.5457 ambiguous 0.101 Stabilizing 0.998 D 0.733 prob.delet. None None None None N
E/Q 0.1127 likely_benign 0.108 benign 0.002 Stabilizing 0.999 D 0.617 neutral D 0.523245195 None None N
E/R 0.1984 likely_benign 0.188 benign 0.547 Stabilizing 0.998 D 0.645 neutral None None None None N
E/S 0.1804 likely_benign 0.1597 benign -0.197 Destabilizing 0.693 D 0.298 neutral None None None None N
E/T 0.215 likely_benign 0.1834 benign -0.075 Destabilizing 0.967 D 0.659 neutral None None None None N
E/V 0.1723 likely_benign 0.1475 benign 0.101 Stabilizing 0.997 D 0.679 prob.neutral N 0.52032232 None None N
E/W 0.8848 likely_pathogenic 0.8521 pathogenic -0.017 Destabilizing 1.0 D 0.665 neutral None None None None N
E/Y 0.5936 likely_pathogenic 0.5421 ambiguous 0.128 Stabilizing 0.999 D 0.71 prob.delet. None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.