Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7897 | 23914;23915;23916 | chr2:178719803;178719802;178719801 | chr2:179584530;179584529;179584528 |
N2AB | 7580 | 22963;22964;22965 | chr2:178719803;178719802;178719801 | chr2:179584530;179584529;179584528 |
N2A | 6653 | 20182;20183;20184 | chr2:178719803;178719802;178719801 | chr2:179584530;179584529;179584528 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | rs1276562007 | None | 0.852 | N | 0.456 | 0.21 | 0.107399877778 | gnomAD-4.0.0 | 1.59651E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77747E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0777 | likely_benign | 0.0702 | benign | -0.548 | Destabilizing | 0.134 | N | 0.243 | neutral | N | 0.493822713 | None | None | N |
P/C | 0.5975 | likely_pathogenic | 0.4945 | ambiguous | -0.597 | Destabilizing | 0.999 | D | 0.601 | neutral | None | None | None | None | N |
P/D | 0.3344 | likely_benign | 0.2647 | benign | -0.623 | Destabilizing | 0.884 | D | 0.469 | neutral | None | None | None | None | N |
P/E | 0.2436 | likely_benign | 0.2036 | benign | -0.74 | Destabilizing | 0.939 | D | 0.465 | neutral | None | None | None | None | N |
P/F | 0.5167 | ambiguous | 0.416 | ambiguous | -0.773 | Destabilizing | 0.991 | D | 0.594 | neutral | None | None | None | None | N |
P/G | 0.3286 | likely_benign | 0.2625 | benign | -0.681 | Destabilizing | 0.939 | D | 0.505 | neutral | None | None | None | None | N |
P/H | 0.219 | likely_benign | 0.1748 | benign | -0.252 | Destabilizing | 0.997 | D | 0.572 | neutral | N | 0.461047712 | None | None | N |
P/I | 0.3531 | ambiguous | 0.2957 | benign | -0.345 | Destabilizing | 0.884 | D | 0.549 | neutral | None | None | None | None | N |
P/K | 0.3205 | likely_benign | 0.2539 | benign | -0.591 | Destabilizing | 0.939 | D | 0.462 | neutral | None | None | None | None | N |
P/L | 0.1406 | likely_benign | 0.124 | benign | -0.345 | Destabilizing | 0.852 | D | 0.513 | neutral | N | 0.514467344 | None | None | N |
P/M | 0.3153 | likely_benign | 0.2665 | benign | -0.396 | Destabilizing | 0.991 | D | 0.574 | neutral | None | None | None | None | N |
P/N | 0.3049 | likely_benign | 0.2318 | benign | -0.286 | Destabilizing | 0.17 | N | 0.379 | neutral | None | None | None | None | N |
P/Q | 0.1691 | likely_benign | 0.1388 | benign | -0.561 | Destabilizing | 0.991 | D | 0.551 | neutral | None | None | None | None | N |
P/R | 0.2171 | likely_benign | 0.1726 | benign | -0.014 | Destabilizing | 0.988 | D | 0.587 | neutral | N | 0.462515742 | None | None | N |
P/S | 0.1233 | likely_benign | 0.0993 | benign | -0.588 | Destabilizing | 0.852 | D | 0.456 | neutral | N | 0.398813609 | None | None | N |
P/T | 0.1127 | likely_benign | 0.0955 | benign | -0.612 | Destabilizing | 0.92 | D | 0.451 | neutral | N | 0.510637605 | None | None | N |
P/V | 0.2367 | likely_benign | 0.2006 | benign | -0.378 | Destabilizing | 0.17 | N | 0.4 | neutral | None | None | None | None | N |
P/W | 0.6956 | likely_pathogenic | 0.5857 | pathogenic | -0.853 | Destabilizing | 0.999 | D | 0.644 | neutral | None | None | None | None | N |
P/Y | 0.471 | ambiguous | 0.3753 | ambiguous | -0.567 | Destabilizing | 0.997 | D | 0.594 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.