Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7898 | 23917;23918;23919 | chr2:178719800;178719799;178719798 | chr2:179584527;179584526;179584525 |
N2AB | 7581 | 22966;22967;22968 | chr2:178719800;178719799;178719798 | chr2:179584527;179584526;179584525 |
N2A | 6654 | 20185;20186;20187 | chr2:178719800;178719799;178719798 | chr2:179584527;179584526;179584525 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/I | rs751897366 | -0.435 | 0.001 | N | 0.057 | 0.139 | 0.339793275041 | gnomAD-2.1.1 | 6.07E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 4.90966E-04 | None | 0 | 0 | 0 |
M/I | rs751897366 | -0.435 | 0.001 | N | 0.057 | 0.139 | 0.339793275041 | gnomAD-3.1.2 | 2.63E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 8.28157E-04 | 0 |
M/I | rs751897366 | -0.435 | 0.001 | N | 0.057 | 0.139 | 0.339793275041 | gnomAD-4.0.0 | 6.84579E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99938E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.3608 | ambiguous | 0.3971 | ambiguous | -2.101 | Highly Destabilizing | 0.176 | N | 0.245 | neutral | None | None | None | None | N |
M/C | 0.782 | likely_pathogenic | 0.8099 | pathogenic | -1.628 | Destabilizing | 0.981 | D | 0.459 | neutral | None | None | None | None | N |
M/D | 0.8985 | likely_pathogenic | 0.9234 | pathogenic | -0.941 | Destabilizing | 0.704 | D | 0.615 | neutral | None | None | None | None | N |
M/E | 0.5453 | ambiguous | 0.6007 | pathogenic | -0.823 | Destabilizing | 0.704 | D | 0.537 | neutral | None | None | None | None | N |
M/F | 0.4022 | ambiguous | 0.3914 | ambiguous | -0.782 | Destabilizing | 0.704 | D | 0.317 | neutral | None | None | None | None | N |
M/G | 0.6685 | likely_pathogenic | 0.7121 | pathogenic | -2.501 | Highly Destabilizing | 0.704 | D | 0.515 | neutral | None | None | None | None | N |
M/H | 0.6439 | likely_pathogenic | 0.7078 | pathogenic | -1.599 | Destabilizing | 0.981 | D | 0.515 | neutral | None | None | None | None | N |
M/I | 0.2602 | likely_benign | 0.3002 | benign | -1.011 | Destabilizing | 0.001 | N | 0.057 | neutral | N | 0.399396052 | None | None | N |
M/K | 0.2644 | likely_benign | 0.3138 | benign | -1.004 | Destabilizing | 0.642 | D | 0.459 | neutral | N | 0.485246955 | None | None | N |
M/L | 0.127 | likely_benign | 0.1515 | benign | -1.011 | Destabilizing | 0.001 | N | 0.042 | neutral | N | 0.419616608 | None | None | N |
M/N | 0.668 | likely_pathogenic | 0.727 | pathogenic | -1.061 | Destabilizing | 0.704 | D | 0.59 | neutral | None | None | None | None | N |
M/P | 0.9472 | likely_pathogenic | 0.9591 | pathogenic | -1.35 | Destabilizing | 0.828 | D | 0.59 | neutral | None | None | None | None | N |
M/Q | 0.2887 | likely_benign | 0.317 | benign | -0.974 | Destabilizing | 0.828 | D | 0.431 | neutral | None | None | None | None | N |
M/R | 0.2698 | likely_benign | 0.3224 | benign | -0.68 | Destabilizing | 0.784 | D | 0.525 | neutral | N | 0.472760447 | None | None | N |
M/S | 0.4973 | ambiguous | 0.5334 | ambiguous | -1.71 | Destabilizing | 0.329 | N | 0.385 | neutral | None | None | None | None | N |
M/T | 0.2008 | likely_benign | 0.2236 | benign | -1.465 | Destabilizing | 0.003 | N | 0.135 | neutral | N | 0.435799569 | None | None | N |
M/V | 0.075 | likely_benign | 0.0841 | benign | -1.35 | Destabilizing | 0.065 | N | 0.223 | neutral | N | 0.381479508 | None | None | N |
M/W | 0.7653 | likely_pathogenic | 0.8041 | pathogenic | -0.811 | Destabilizing | 0.995 | D | 0.427 | neutral | None | None | None | None | N |
M/Y | 0.705 | likely_pathogenic | 0.7415 | pathogenic | -0.862 | Destabilizing | 0.981 | D | 0.565 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.