Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7903 | 23932;23933;23934 | chr2:178719785;178719784;178719783 | chr2:179584512;179584511;179584510 |
N2AB | 7586 | 22981;22982;22983 | chr2:178719785;178719784;178719783 | chr2:179584512;179584511;179584510 |
N2A | 6659 | 20200;20201;20202 | chr2:178719785;178719784;178719783 | chr2:179584512;179584511;179584510 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/E | rs1362459833 | -1.609 | 1.0 | D | 0.879 | 0.598 | 0.832462731495 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 6.47E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
G/E | rs1362459833 | -1.609 | 1.0 | D | 0.879 | 0.598 | 0.832462731495 | gnomAD-4.0.0 | 6.84411E-07 | None | None | None | None | N | None | 2.98954E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
G/V | None | None | 1.0 | D | 0.884 | 0.622 | 0.941585166729 | gnomAD-4.0.0 | 6.84411E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99713E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.3883 | ambiguous | 0.3693 | ambiguous | -0.391 | Destabilizing | 0.997 | D | 0.635 | neutral | D | 0.630326577 | None | None | N |
G/C | 0.5852 | likely_pathogenic | 0.5592 | ambiguous | -0.832 | Destabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | N |
G/D | 0.3801 | ambiguous | 0.355 | ambiguous | -0.838 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
G/E | 0.4008 | ambiguous | 0.3915 | ambiguous | -1.012 | Destabilizing | 1.0 | D | 0.879 | deleterious | D | 0.612894586 | None | None | N |
G/F | 0.8951 | likely_pathogenic | 0.8732 | pathogenic | -1.187 | Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
G/H | 0.6357 | likely_pathogenic | 0.6087 | pathogenic | -0.644 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
G/I | 0.8747 | likely_pathogenic | 0.84 | pathogenic | -0.541 | Destabilizing | 1.0 | D | 0.89 | deleterious | None | None | None | None | N |
G/K | 0.5287 | ambiguous | 0.5265 | ambiguous | -0.858 | Destabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | N |
G/L | 0.8081 | likely_pathogenic | 0.7867 | pathogenic | -0.541 | Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
G/M | 0.8342 | likely_pathogenic | 0.8085 | pathogenic | -0.387 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
G/N | 0.42 | ambiguous | 0.4071 | ambiguous | -0.492 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
G/P | 0.986 | likely_pathogenic | 0.984 | pathogenic | -0.458 | Destabilizing | 1.0 | D | 0.872 | deleterious | None | None | None | None | N |
G/Q | 0.4539 | ambiguous | 0.4493 | ambiguous | -0.84 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
G/R | 0.3789 | ambiguous | 0.3684 | ambiguous | -0.35 | Destabilizing | 1.0 | D | 0.875 | deleterious | D | 0.619616643 | None | None | N |
G/S | 0.186 | likely_benign | 0.1802 | benign | -0.608 | Destabilizing | 0.986 | D | 0.553 | neutral | None | None | None | None | N |
G/T | 0.5122 | ambiguous | 0.4781 | ambiguous | -0.723 | Destabilizing | 0.999 | D | 0.863 | deleterious | None | None | None | None | N |
G/V | 0.7643 | likely_pathogenic | 0.7189 | pathogenic | -0.458 | Destabilizing | 1.0 | D | 0.884 | deleterious | D | 0.668108695 | None | None | N |
G/W | 0.7515 | likely_pathogenic | 0.7212 | pathogenic | -1.319 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
G/Y | 0.8026 | likely_pathogenic | 0.7753 | pathogenic | -0.976 | Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.