Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7909 | 23950;23951;23952 | chr2:178719767;178719766;178719765 | chr2:179584494;179584493;179584492 |
N2AB | 7592 | 22999;23000;23001 | chr2:178719767;178719766;178719765 | chr2:179584494;179584493;179584492 |
N2A | 6665 | 20218;20219;20220 | chr2:178719767;178719766;178719765 | chr2:179584494;179584493;179584492 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.994 | D | 0.646 | 0.592 | 0.610906440916 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/Q | rs1161435142 | -0.388 | 0.998 | D | 0.65 | 0.474 | 0.436993770938 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/Q | rs1161435142 | -0.388 | 0.998 | D | 0.65 | 0.474 | 0.436993770938 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/Q | rs1161435142 | -0.388 | 0.998 | D | 0.65 | 0.474 | 0.436993770938 | gnomAD-4.0.0 | 2.23122E-05 | None | None | None | None | I | None | 0 | 0 | None | 3.37861E-05 | 0 | None | 0 | 0 | 2.8822E-05 | 0 | 1.60159E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3735 | ambiguous | 0.4492 | ambiguous | -0.849 | Destabilizing | 0.994 | D | 0.642 | neutral | N | 0.510611121 | None | None | I |
E/C | 0.9525 | likely_pathogenic | 0.9689 | pathogenic | -0.411 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | I |
E/D | 0.3481 | ambiguous | 0.4163 | ambiguous | -1.118 | Destabilizing | 0.104 | N | 0.229 | neutral | N | 0.504027755 | None | None | I |
E/F | 0.9012 | likely_pathogenic | 0.9284 | pathogenic | -0.405 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | I |
E/G | 0.5004 | ambiguous | 0.5757 | pathogenic | -1.198 | Destabilizing | 0.994 | D | 0.646 | neutral | D | 0.529084224 | None | None | I |
E/H | 0.6827 | likely_pathogenic | 0.7609 | pathogenic | -0.637 | Destabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | I |
E/I | 0.6322 | likely_pathogenic | 0.7188 | pathogenic | 0.097 | Stabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | I |
E/K | 0.4101 | ambiguous | 0.5325 | ambiguous | -0.529 | Destabilizing | 0.994 | D | 0.555 | neutral | N | 0.49116374 | None | None | I |
E/L | 0.6837 | likely_pathogenic | 0.779 | pathogenic | 0.097 | Stabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | I |
E/M | 0.7271 | likely_pathogenic | 0.798 | pathogenic | 0.543 | Stabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | I |
E/N | 0.5765 | likely_pathogenic | 0.6828 | pathogenic | -1.004 | Destabilizing | 0.998 | D | 0.671 | neutral | None | None | None | None | I |
E/P | 0.9763 | likely_pathogenic | 0.9809 | pathogenic | -0.197 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | I |
E/Q | 0.2042 | likely_benign | 0.2557 | benign | -0.884 | Destabilizing | 0.998 | D | 0.65 | neutral | D | 0.53423298 | None | None | I |
E/R | 0.5537 | ambiguous | 0.6543 | pathogenic | -0.265 | Destabilizing | 0.999 | D | 0.696 | prob.neutral | None | None | None | None | I |
E/S | 0.4097 | ambiguous | 0.4907 | ambiguous | -1.284 | Destabilizing | 0.992 | D | 0.559 | neutral | None | None | None | None | I |
E/T | 0.4215 | ambiguous | 0.5275 | ambiguous | -0.995 | Destabilizing | 0.999 | D | 0.769 | deleterious | None | None | None | None | I |
E/V | 0.4132 | ambiguous | 0.5008 | ambiguous | -0.197 | Destabilizing | 0.999 | D | 0.765 | deleterious | N | 0.508270944 | None | None | I |
E/W | 0.9687 | likely_pathogenic | 0.9776 | pathogenic | -0.173 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | I |
E/Y | 0.8468 | likely_pathogenic | 0.8877 | pathogenic | -0.155 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.