Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7912 | 23959;23960;23961 | chr2:178719758;178719757;178719756 | chr2:179584485;179584484;179584483 |
N2AB | 7595 | 23008;23009;23010 | chr2:178719758;178719757;178719756 | chr2:179584485;179584484;179584483 |
N2A | 6668 | 20227;20228;20229 | chr2:178719758;178719757;178719756 | chr2:179584485;179584484;179584483 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | rs797001857 | 0.053 | 0.9 | D | 0.634 | 0.414 | 0.653643074943 | gnomAD-2.1.1 | 3.18E-05 | None | None | None | None | N | None | 1.14758E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
V/L | rs797001857 | 0.053 | 0.9 | D | 0.634 | 0.414 | 0.653643074943 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 4.82E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/L | rs797001857 | 0.053 | 0.9 | D | 0.634 | 0.414 | 0.653643074943 | gnomAD-4.0.0 | 5.12538E-06 | None | None | None | None | N | None | 3.38249E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 4.78719E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5806 | likely_pathogenic | 0.6223 | pathogenic | -1.917 | Destabilizing | 0.989 | D | 0.634 | neutral | D | 0.525064497 | None | None | N |
V/C | 0.9498 | likely_pathogenic | 0.9602 | pathogenic | -1.37 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
V/D | 0.9913 | likely_pathogenic | 0.9948 | pathogenic | -2.518 | Highly Destabilizing | 0.999 | D | 0.864 | deleterious | None | None | None | None | N |
V/E | 0.9729 | likely_pathogenic | 0.9826 | pathogenic | -2.25 | Highly Destabilizing | 0.999 | D | 0.862 | deleterious | D | 0.637305825 | None | None | N |
V/F | 0.4135 | ambiguous | 0.4362 | ambiguous | -1.044 | Destabilizing | 0.296 | N | 0.497 | neutral | None | None | None | None | N |
V/G | 0.8215 | likely_pathogenic | 0.84 | pathogenic | -2.505 | Highly Destabilizing | 0.999 | D | 0.851 | deleterious | D | 0.586229601 | None | None | N |
V/H | 0.9891 | likely_pathogenic | 0.9927 | pathogenic | -2.319 | Highly Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
V/I | 0.1014 | likely_benign | 0.126 | benign | -0.257 | Destabilizing | 0.96 | D | 0.582 | neutral | None | None | None | None | N |
V/K | 0.9835 | likely_pathogenic | 0.9898 | pathogenic | -1.625 | Destabilizing | 0.999 | D | 0.858 | deleterious | None | None | None | None | N |
V/L | 0.4674 | ambiguous | 0.5908 | pathogenic | -0.257 | Destabilizing | 0.9 | D | 0.634 | neutral | D | 0.558178757 | None | None | N |
V/M | 0.4417 | ambiguous | 0.5309 | ambiguous | -0.315 | Destabilizing | 0.999 | D | 0.739 | prob.delet. | D | 0.611364105 | None | None | N |
V/N | 0.9791 | likely_pathogenic | 0.9865 | pathogenic | -2.086 | Highly Destabilizing | 0.999 | D | 0.881 | deleterious | None | None | None | None | N |
V/P | 0.981 | likely_pathogenic | 0.9878 | pathogenic | -0.784 | Destabilizing | 0.999 | D | 0.861 | deleterious | None | None | None | None | N |
V/Q | 0.9728 | likely_pathogenic | 0.9809 | pathogenic | -1.824 | Destabilizing | 0.999 | D | 0.879 | deleterious | None | None | None | None | N |
V/R | 0.97 | likely_pathogenic | 0.9786 | pathogenic | -1.611 | Destabilizing | 0.999 | D | 0.885 | deleterious | None | None | None | None | N |
V/S | 0.8775 | likely_pathogenic | 0.898 | pathogenic | -2.71 | Highly Destabilizing | 0.999 | D | 0.849 | deleterious | None | None | None | None | N |
V/T | 0.7249 | likely_pathogenic | 0.7753 | pathogenic | -2.282 | Highly Destabilizing | 0.997 | D | 0.706 | prob.neutral | None | None | None | None | N |
V/W | 0.9836 | likely_pathogenic | 0.9877 | pathogenic | -1.621 | Destabilizing | 1.0 | D | 0.874 | deleterious | None | None | None | None | N |
V/Y | 0.9355 | likely_pathogenic | 0.9475 | pathogenic | -1.184 | Destabilizing | 0.99 | D | 0.822 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.