Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7913 | 23962;23963;23964 | chr2:178719755;178719754;178719753 | chr2:179584482;179584481;179584480 |
N2AB | 7596 | 23011;23012;23013 | chr2:178719755;178719754;178719753 | chr2:179584482;179584481;179584480 |
N2A | 6669 | 20230;20231;20232 | chr2:178719755;178719754;178719753 | chr2:179584482;179584481;179584480 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.022 | D | 0.365 | 0.117 | 0.316494231283 | gnomAD-4.0.0 | 6.8427E-07 | None | None | None | None | I | None | 0 | 2.23634E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/S | None | None | 0.027 | N | 0.37 | 0.12 | 0.180583059064 | gnomAD-4.0.0 | 6.8427E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99536E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.057 | likely_benign | 0.0604 | benign | -0.497 | Destabilizing | None | N | 0.071 | neutral | N | 0.444920485 | None | None | I |
T/C | 0.4024 | ambiguous | 0.404 | ambiguous | -0.373 | Destabilizing | 0.001 | N | 0.193 | neutral | None | None | None | None | I |
T/D | 0.2098 | likely_benign | 0.2289 | benign | 0.333 | Stabilizing | 0.149 | N | 0.361 | neutral | None | None | None | None | I |
T/E | 0.1894 | likely_benign | 0.2033 | benign | 0.333 | Stabilizing | 0.149 | N | 0.377 | neutral | None | None | None | None | I |
T/F | 0.2029 | likely_benign | 0.211 | benign | -0.659 | Destabilizing | 0.38 | N | 0.417 | neutral | None | None | None | None | I |
T/G | 0.1567 | likely_benign | 0.1768 | benign | -0.734 | Destabilizing | None | N | 0.261 | neutral | None | None | None | None | I |
T/H | 0.2398 | likely_benign | 0.243 | benign | -0.916 | Destabilizing | 0.935 | D | 0.362 | neutral | None | None | None | None | I |
T/I | 0.1624 | likely_benign | 0.1748 | benign | 0.032 | Stabilizing | 0.022 | N | 0.365 | neutral | D | 0.52732565 | None | None | I |
T/K | 0.1731 | likely_benign | 0.1753 | benign | -0.387 | Destabilizing | 0.149 | N | 0.379 | neutral | None | None | None | None | I |
T/L | 0.0977 | likely_benign | 0.1028 | benign | 0.032 | Stabilizing | 0.035 | N | 0.359 | neutral | None | None | None | None | I |
T/M | 0.0883 | likely_benign | 0.0896 | benign | 0.033 | Stabilizing | 0.555 | D | 0.336 | neutral | None | None | None | None | I |
T/N | 0.1072 | likely_benign | 0.1103 | benign | -0.365 | Destabilizing | 0.317 | N | 0.396 | neutral | N | 0.516898013 | None | None | I |
T/P | 0.537 | ambiguous | 0.5531 | ambiguous | -0.111 | Destabilizing | 0.317 | N | 0.385 | neutral | D | 0.526576289 | None | None | I |
T/Q | 0.1978 | likely_benign | 0.2021 | benign | -0.446 | Destabilizing | 0.555 | D | 0.372 | neutral | None | None | None | None | I |
T/R | 0.1413 | likely_benign | 0.1358 | benign | -0.217 | Destabilizing | 0.38 | N | 0.375 | neutral | None | None | None | None | I |
T/S | 0.0786 | likely_benign | 0.0812 | benign | -0.658 | Destabilizing | 0.027 | N | 0.37 | neutral | N | 0.42646801 | None | None | I |
T/V | 0.1265 | likely_benign | 0.1359 | benign | -0.111 | Destabilizing | 0.001 | N | 0.111 | neutral | None | None | None | None | I |
T/W | 0.5198 | ambiguous | 0.5097 | ambiguous | -0.655 | Destabilizing | 0.935 | D | 0.417 | neutral | None | None | None | None | I |
T/Y | 0.2631 | likely_benign | 0.2541 | benign | -0.37 | Destabilizing | 0.555 | D | 0.407 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.