Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7924 | 23995;23996;23997 | chr2:178719722;178719721;178719720 | chr2:179584449;179584448;179584447 |
N2AB | 7607 | 23044;23045;23046 | chr2:178719722;178719721;178719720 | chr2:179584449;179584448;179584447 |
N2A | 6680 | 20263;20264;20265 | chr2:178719722;178719721;178719720 | chr2:179584449;179584448;179584447 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs373894127 | -1.121 | 0.999 | D | 0.725 | 0.412 | 0.277730125212 | gnomAD-2.1.1 | 2.41E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 5.34E-05 | 0 |
K/N | rs373894127 | -1.121 | 0.999 | D | 0.725 | 0.412 | 0.277730125212 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
K/N | rs373894127 | -1.121 | 0.999 | D | 0.725 | 0.412 | 0.277730125212 | gnomAD-4.0.0 | 1.42537E-05 | None | None | None | None | N | None | 0 | 1.66706E-05 | None | 0 | 0 | None | 0 | 0 | 1.86487E-05 | 0 | 0 |
K/Q | rs770650362 | -1.018 | 0.999 | D | 0.709 | 0.409 | 0.375147631797 | gnomAD-2.1.1 | 7.14E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.56E-05 | 0 |
K/Q | rs770650362 | -1.018 | 0.999 | D | 0.709 | 0.409 | 0.375147631797 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 4.41E-05 | 0 | 0 |
K/Q | rs770650362 | -1.018 | 0.999 | D | 0.709 | 0.409 | 0.375147631797 | gnomAD-4.0.0 | 6.81684E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.32425E-06 | 0 | 0 |
K/R | rs749465424 | -0.743 | 0.64 | N | 0.355 | 0.28 | 0.228597637076 | gnomAD-2.1.1 | 8.04E-06 | None | None | None | None | N | None | 0 | 5.79E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/R | rs749465424 | -0.743 | 0.64 | N | 0.355 | 0.28 | 0.228597637076 | gnomAD-4.0.0 | 3.18287E-06 | None | None | None | None | N | None | 0 | 4.57289E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.9666 | likely_pathogenic | 0.963 | pathogenic | -1.091 | Destabilizing | 0.998 | D | 0.578 | neutral | None | None | None | None | N |
K/C | 0.9429 | likely_pathogenic | 0.9438 | pathogenic | -1.102 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
K/D | 0.996 | likely_pathogenic | 0.9962 | pathogenic | -0.773 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
K/E | 0.9046 | likely_pathogenic | 0.8992 | pathogenic | -0.592 | Destabilizing | 0.996 | D | 0.526 | neutral | D | 0.529614661 | None | None | N |
K/F | 0.9704 | likely_pathogenic | 0.9682 | pathogenic | -0.707 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
K/G | 0.9865 | likely_pathogenic | 0.9862 | pathogenic | -1.521 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
K/H | 0.7097 | likely_pathogenic | 0.7238 | pathogenic | -1.863 | Destabilizing | 1.0 | D | 0.806 | deleterious | None | None | None | None | N |
K/I | 0.8668 | likely_pathogenic | 0.8563 | pathogenic | 0.069 | Stabilizing | 1.0 | D | 0.873 | deleterious | D | 0.533120153 | None | None | N |
K/L | 0.8422 | likely_pathogenic | 0.8247 | pathogenic | 0.069 | Stabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
K/M | 0.7725 | likely_pathogenic | 0.7559 | pathogenic | 0.051 | Stabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
K/N | 0.9815 | likely_pathogenic | 0.9811 | pathogenic | -1.115 | Destabilizing | 0.999 | D | 0.725 | prob.delet. | D | 0.529361172 | None | None | N |
K/P | 0.9978 | likely_pathogenic | 0.9976 | pathogenic | -0.29 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
K/Q | 0.5803 | likely_pathogenic | 0.5696 | pathogenic | -1.07 | Destabilizing | 0.999 | D | 0.709 | prob.delet. | D | 0.528854193 | None | None | N |
K/R | 0.1057 | likely_benign | 0.1085 | benign | -0.939 | Destabilizing | 0.64 | D | 0.355 | neutral | N | 0.472282794 | None | None | N |
K/S | 0.9793 | likely_pathogenic | 0.9772 | pathogenic | -1.817 | Destabilizing | 0.998 | D | 0.593 | neutral | None | None | None | None | N |
K/T | 0.946 | likely_pathogenic | 0.9388 | pathogenic | -1.392 | Destabilizing | 0.999 | D | 0.76 | deleterious | D | 0.529107682 | None | None | N |
K/V | 0.8524 | likely_pathogenic | 0.8411 | pathogenic | -0.29 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
K/W | 0.9454 | likely_pathogenic | 0.9417 | pathogenic | -0.587 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
K/Y | 0.919 | likely_pathogenic | 0.9192 | pathogenic | -0.272 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.