Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7927 | 24004;24005;24006 | chr2:178719713;178719712;178719711 | chr2:179584440;179584439;179584438 |
N2AB | 7610 | 23053;23054;23055 | chr2:178719713;178719712;178719711 | chr2:179584440;179584439;179584438 |
N2A | 6683 | 20272;20273;20274 | chr2:178719713;178719712;178719711 | chr2:179584440;179584439;179584438 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | None | None | None | N | 0.189 | 0.106 | 0.101711395817 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.2165 | likely_benign | 0.26 | benign | 0.078 | Stabilizing | 0.002 | N | 0.209 | neutral | None | None | None | None | N |
R/C | 0.1586 | likely_benign | 0.1883 | benign | -0.143 | Destabilizing | 0.958 | D | 0.271 | neutral | None | None | None | None | N |
R/D | 0.4054 | ambiguous | 0.491 | ambiguous | -0.129 | Destabilizing | 0.22 | N | 0.426 | neutral | None | None | None | None | N |
R/E | 0.1733 | likely_benign | 0.2097 | benign | -0.07 | Destabilizing | 0.055 | N | 0.31 | neutral | None | None | None | None | N |
R/F | 0.3148 | likely_benign | 0.3855 | ambiguous | -0.177 | Destabilizing | 0.667 | D | 0.343 | neutral | None | None | None | None | N |
R/G | 0.1687 | likely_benign | 0.2067 | benign | -0.1 | Destabilizing | 0.081 | N | 0.376 | neutral | N | 0.515223145 | None | None | N |
R/H | 0.0893 | likely_benign | 0.0977 | benign | -0.603 | Destabilizing | 0.667 | D | 0.311 | neutral | None | None | None | None | N |
R/I | 0.1193 | likely_benign | 0.1398 | benign | 0.505 | Stabilizing | 0.003 | N | 0.27 | neutral | N | 0.506334303 | None | None | N |
R/K | 0.0685 | likely_benign | 0.0713 | benign | -0.031 | Destabilizing | None | N | 0.189 | neutral | N | 0.414576148 | None | None | N |
R/L | 0.1439 | likely_benign | 0.1695 | benign | 0.505 | Stabilizing | 0.055 | N | 0.341 | neutral | None | None | None | None | N |
R/M | 0.1249 | likely_benign | 0.1421 | benign | 0.03 | Stabilizing | 0.667 | D | 0.324 | neutral | None | None | None | None | N |
R/N | 0.285 | likely_benign | 0.3388 | benign | 0.106 | Stabilizing | 0.22 | N | 0.317 | neutral | None | None | None | None | N |
R/P | 0.8106 | likely_pathogenic | 0.8578 | pathogenic | 0.383 | Stabilizing | 0.364 | N | 0.397 | neutral | None | None | None | None | N |
R/Q | 0.0786 | likely_benign | 0.0832 | benign | 0.049 | Stabilizing | 0.124 | N | 0.323 | neutral | None | None | None | None | N |
R/S | 0.2562 | likely_benign | 0.3119 | benign | -0.16 | Destabilizing | 0.042 | N | 0.391 | neutral | N | 0.493978294 | None | None | N |
R/T | 0.1244 | likely_benign | 0.15 | benign | 0.025 | Stabilizing | 0.081 | N | 0.379 | neutral | N | 0.5126442 | None | None | N |
R/V | 0.1661 | likely_benign | 0.1924 | benign | 0.383 | Stabilizing | 0.002 | N | 0.251 | neutral | None | None | None | None | N |
R/W | 0.1354 | likely_benign | 0.155 | benign | -0.3 | Destabilizing | 0.958 | D | 0.274 | neutral | None | None | None | None | N |
R/Y | 0.2503 | likely_benign | 0.308 | benign | 0.119 | Stabilizing | 0.859 | D | 0.34 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.