Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7928 | 24007;24008;24009 | chr2:178719710;178719709;178719708 | chr2:179584437;179584436;179584435 |
N2AB | 7611 | 23056;23057;23058 | chr2:178719710;178719709;178719708 | chr2:179584437;179584436;179584435 |
N2A | 6684 | 20275;20276;20277 | chr2:178719710;178719709;178719708 | chr2:179584437;179584436;179584435 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | rs770121355 | -0.439 | 0.689 | N | 0.243 | 0.302 | 0.329540904979 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
E/Q | rs770121355 | -0.439 | 0.689 | N | 0.243 | 0.302 | 0.329540904979 | gnomAD-4.0.0 | 4.77435E-06 | None | None | None | None | N | None | 0 | 2.28655E-05 | None | 0 | 0 | None | 0 | 0 | 5.71759E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1519 | likely_benign | 0.1588 | benign | -0.509 | Destabilizing | 0.248 | N | 0.324 | neutral | N | 0.498165179 | None | None | N |
E/C | 0.8316 | likely_pathogenic | 0.8695 | pathogenic | -0.33 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
E/D | 0.3255 | likely_benign | 0.35 | ambiguous | -0.532 | Destabilizing | 0.961 | D | 0.463 | neutral | N | 0.498708157 | None | None | N |
E/F | 0.7365 | likely_pathogenic | 0.7941 | pathogenic | 0.099 | Stabilizing | 0.999 | D | 0.718 | prob.delet. | None | None | None | None | N |
E/G | 0.282 | likely_benign | 0.3037 | benign | -0.793 | Destabilizing | 0.961 | D | 0.595 | neutral | N | 0.521170959 | None | None | N |
E/H | 0.5732 | likely_pathogenic | 0.6219 | pathogenic | 0.382 | Stabilizing | 0.996 | D | 0.561 | neutral | None | None | None | None | N |
E/I | 0.245 | likely_benign | 0.3076 | benign | 0.242 | Stabilizing | 0.996 | D | 0.721 | prob.delet. | None | None | None | None | N |
E/K | 0.166 | likely_benign | 0.1926 | benign | 0.188 | Stabilizing | 0.248 | N | 0.28 | neutral | D | 0.533288831 | None | None | N |
E/L | 0.2709 | likely_benign | 0.3276 | benign | 0.242 | Stabilizing | 0.97 | D | 0.597 | neutral | None | None | None | None | N |
E/M | 0.3438 | ambiguous | 0.3935 | ambiguous | 0.261 | Stabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | N |
E/N | 0.4422 | ambiguous | 0.489 | ambiguous | -0.521 | Destabilizing | 0.996 | D | 0.516 | neutral | None | None | None | None | N |
E/P | 0.2981 | likely_benign | 0.2941 | benign | 0.012 | Stabilizing | 0.999 | D | 0.647 | neutral | None | None | None | None | N |
E/Q | 0.1387 | likely_benign | 0.1486 | benign | -0.401 | Destabilizing | 0.689 | D | 0.243 | neutral | N | 0.499228362 | None | None | N |
E/R | 0.2977 | likely_benign | 0.3293 | benign | 0.578 | Stabilizing | 0.942 | D | 0.494 | neutral | None | None | None | None | N |
E/S | 0.3276 | likely_benign | 0.3483 | ambiguous | -0.678 | Destabilizing | 0.942 | D | 0.459 | neutral | None | None | None | None | N |
E/T | 0.2969 | likely_benign | 0.3421 | ambiguous | -0.424 | Destabilizing | 0.97 | D | 0.579 | neutral | None | None | None | None | N |
E/V | 0.1497 | likely_benign | 0.1795 | benign | 0.012 | Stabilizing | 0.961 | D | 0.587 | neutral | N | 0.499837473 | None | None | N |
E/W | 0.9041 | likely_pathogenic | 0.929 | pathogenic | 0.403 | Stabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | N |
E/Y | 0.6508 | likely_pathogenic | 0.7138 | pathogenic | 0.388 | Stabilizing | 0.999 | D | 0.715 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.