Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7930 | 24013;24014;24015 | chr2:178719704;178719703;178719702 | chr2:179584431;179584430;179584429 |
N2AB | 7613 | 23062;23063;23064 | chr2:178719704;178719703;178719702 | chr2:179584431;179584430;179584429 |
N2A | 6686 | 20281;20282;20283 | chr2:178719704;178719703;178719702 | chr2:179584431;179584430;179584429 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | None | None | 0.029 | N | 0.454 | 0.267 | 0.508163421412 | gnomAD-4.0.0 | 1.59141E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43283E-05 | 0 |
S/P | rs2078046090 | None | 0.055 | N | 0.366 | 0.218 | 0.115124310173 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
S/P | rs2078046090 | None | 0.055 | N | 0.366 | 0.218 | 0.115124310173 | gnomAD-4.0.0 | 6.5735E-06 | None | None | None | None | N | None | 2.41406E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0599 | likely_benign | 0.0658 | benign | -0.245 | Destabilizing | None | N | 0.12 | neutral | N | 0.472587088 | None | None | N |
S/C | 0.0944 | likely_benign | 0.0995 | benign | -0.264 | Destabilizing | 0.295 | N | 0.365 | neutral | D | 0.52453832 | None | None | N |
S/D | 0.203 | likely_benign | 0.225 | benign | -0.025 | Destabilizing | 0.031 | N | 0.221 | neutral | None | None | None | None | N |
S/E | 0.2361 | likely_benign | 0.2756 | benign | -0.094 | Destabilizing | 0.016 | N | 0.254 | neutral | None | None | None | None | N |
S/F | 0.1064 | likely_benign | 0.1236 | benign | -0.791 | Destabilizing | 0.029 | N | 0.454 | neutral | N | 0.498040274 | None | None | N |
S/G | 0.0806 | likely_benign | 0.0794 | benign | -0.38 | Destabilizing | 0.016 | N | 0.229 | neutral | None | None | None | None | N |
S/H | 0.1542 | likely_benign | 0.1678 | benign | -0.783 | Destabilizing | 0.214 | N | 0.377 | neutral | None | None | None | None | N |
S/I | 0.0901 | likely_benign | 0.097 | benign | -0.015 | Destabilizing | 0.072 | N | 0.463 | neutral | None | None | None | None | N |
S/K | 0.2318 | likely_benign | 0.2642 | benign | -0.507 | Destabilizing | None | N | 0.159 | neutral | None | None | None | None | N |
S/L | 0.0669 | likely_benign | 0.0717 | benign | -0.015 | Destabilizing | 0.016 | N | 0.362 | neutral | None | None | None | None | N |
S/M | 0.1332 | likely_benign | 0.1496 | benign | -0.029 | Destabilizing | 0.356 | N | 0.379 | neutral | None | None | None | None | N |
S/N | 0.092 | likely_benign | 0.0932 | benign | -0.244 | Destabilizing | 0.031 | N | 0.238 | neutral | None | None | None | None | N |
S/P | 0.0934 | likely_benign | 0.0936 | benign | -0.061 | Destabilizing | 0.055 | N | 0.366 | neutral | N | 0.462487525 | None | None | N |
S/Q | 0.2149 | likely_benign | 0.244 | benign | -0.414 | Destabilizing | 0.003 | N | 0.177 | neutral | None | None | None | None | N |
S/R | 0.185 | likely_benign | 0.2012 | benign | -0.288 | Destabilizing | None | N | 0.173 | neutral | None | None | None | None | N |
S/T | 0.0629 | likely_benign | 0.067 | benign | -0.268 | Destabilizing | 0.012 | N | 0.24 | neutral | N | 0.426430724 | None | None | N |
S/V | 0.0985 | likely_benign | 0.111 | benign | -0.061 | Destabilizing | 0.016 | N | 0.388 | neutral | None | None | None | None | N |
S/W | 0.1735 | likely_benign | 0.1914 | benign | -0.883 | Destabilizing | 0.676 | D | 0.424 | neutral | None | None | None | None | N |
S/Y | 0.1061 | likely_benign | 0.1213 | benign | -0.572 | Destabilizing | 0.001 | N | 0.306 | neutral | N | 0.521997188 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.