Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7937 | 24034;24035;24036 | chr2:178719683;178719682;178719681 | chr2:179584410;179584409;179584408 |
N2AB | 7620 | 23083;23084;23085 | chr2:178719683;178719682;178719681 | chr2:179584410;179584409;179584408 |
N2A | 6693 | 20302;20303;20304 | chr2:178719683;178719682;178719681 | chr2:179584410;179584409;179584408 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | None | None | 0.976 | N | 0.515 | 0.347 | 0.4722639086 | gnomAD-4.0.0 | 1.59136E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43279E-05 | 0 |
I/V | None | None | 0.509 | D | 0.384 | 0.155 | 0.602534368506 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.6434 | likely_pathogenic | 0.6982 | pathogenic | -2.122 | Highly Destabilizing | 0.863 | D | 0.451 | neutral | None | None | None | None | N |
I/C | 0.7982 | likely_pathogenic | 0.803 | pathogenic | -1.403 | Destabilizing | 0.999 | D | 0.569 | neutral | None | None | None | None | N |
I/D | 0.9306 | likely_pathogenic | 0.9409 | pathogenic | -1.476 | Destabilizing | 0.991 | D | 0.623 | neutral | None | None | None | None | N |
I/E | 0.8421 | likely_pathogenic | 0.8638 | pathogenic | -1.396 | Destabilizing | 0.991 | D | 0.627 | neutral | None | None | None | None | N |
I/F | 0.1532 | likely_benign | 0.1619 | benign | -1.452 | Destabilizing | 0.976 | D | 0.506 | neutral | N | 0.498218085 | None | None | N |
I/G | 0.8756 | likely_pathogenic | 0.8936 | pathogenic | -2.544 | Highly Destabilizing | 0.991 | D | 0.617 | neutral | None | None | None | None | N |
I/H | 0.7171 | likely_pathogenic | 0.7365 | pathogenic | -1.785 | Destabilizing | 0.999 | D | 0.641 | neutral | None | None | None | None | N |
I/K | 0.6157 | likely_pathogenic | 0.6702 | pathogenic | -1.459 | Destabilizing | 0.982 | D | 0.621 | neutral | None | None | None | None | N |
I/L | 0.1447 | likely_benign | 0.1704 | benign | -0.985 | Destabilizing | 0.005 | N | 0.165 | neutral | D | 0.526882933 | None | None | N |
I/M | 0.1167 | likely_benign | 0.1245 | benign | -0.783 | Destabilizing | 0.976 | D | 0.515 | neutral | N | 0.492102019 | None | None | N |
I/N | 0.5925 | likely_pathogenic | 0.6231 | pathogenic | -1.373 | Destabilizing | 0.988 | D | 0.615 | neutral | D | 0.533567676 | None | None | N |
I/P | 0.8994 | likely_pathogenic | 0.9296 | pathogenic | -1.335 | Destabilizing | 0.997 | D | 0.617 | neutral | None | None | None | None | N |
I/Q | 0.6573 | likely_pathogenic | 0.6862 | pathogenic | -1.442 | Destabilizing | 0.997 | D | 0.631 | neutral | None | None | None | None | N |
I/R | 0.5174 | ambiguous | 0.5656 | pathogenic | -0.971 | Destabilizing | 0.991 | D | 0.614 | neutral | None | None | None | None | N |
I/S | 0.6075 | likely_pathogenic | 0.6378 | pathogenic | -2.111 | Highly Destabilizing | 0.852 | D | 0.505 | neutral | N | 0.504169567 | None | None | N |
I/T | 0.5312 | ambiguous | 0.5787 | pathogenic | -1.892 | Destabilizing | 0.134 | N | 0.33 | neutral | N | 0.50530843 | None | None | N |
I/V | 0.1028 | likely_benign | 0.1128 | benign | -1.335 | Destabilizing | 0.509 | D | 0.384 | neutral | D | 0.529957737 | None | None | N |
I/W | 0.8079 | likely_pathogenic | 0.7999 | pathogenic | -1.586 | Destabilizing | 0.999 | D | 0.669 | neutral | None | None | None | None | N |
I/Y | 0.5835 | likely_pathogenic | 0.5891 | pathogenic | -1.354 | Destabilizing | 0.997 | D | 0.558 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.