Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7939 | 24040;24041;24042 | chr2:178719677;178719676;178719675 | chr2:179584404;179584403;179584402 |
N2AB | 7622 | 23089;23090;23091 | chr2:178719677;178719676;178719675 | chr2:179584404;179584403;179584402 |
N2A | 6695 | 20308;20309;20310 | chr2:178719677;178719676;178719675 | chr2:179584404;179584403;179584402 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | rs866647945 | None | 0.015 | N | 0.301 | 0.183 | 0.104622674875 | gnomAD-4.0.0 | 6.84224E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.65673E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.8532 | likely_pathogenic | 0.8613 | pathogenic | -1.926 | Destabilizing | 0.939 | D | 0.618 | neutral | None | None | None | None | N |
F/C | 0.6535 | likely_pathogenic | 0.656 | pathogenic | -1.107 | Destabilizing | 0.999 | D | 0.669 | neutral | N | 0.51624298 | None | None | N |
F/D | 0.9561 | likely_pathogenic | 0.9557 | pathogenic | -0.359 | Destabilizing | 0.997 | D | 0.687 | prob.neutral | None | None | None | None | N |
F/E | 0.957 | likely_pathogenic | 0.9572 | pathogenic | -0.248 | Destabilizing | 0.997 | D | 0.688 | prob.neutral | None | None | None | None | N |
F/G | 0.9421 | likely_pathogenic | 0.9453 | pathogenic | -2.279 | Highly Destabilizing | 0.991 | D | 0.678 | prob.neutral | None | None | None | None | N |
F/H | 0.8368 | likely_pathogenic | 0.8337 | pathogenic | -0.572 | Destabilizing | 0.999 | D | 0.595 | neutral | None | None | None | None | N |
F/I | 0.33 | likely_benign | 0.3376 | benign | -0.871 | Destabilizing | 0.704 | D | 0.509 | neutral | N | 0.482490006 | None | None | N |
F/K | 0.9648 | likely_pathogenic | 0.9615 | pathogenic | -1.092 | Destabilizing | 0.991 | D | 0.682 | prob.neutral | None | None | None | None | N |
F/L | 0.8628 | likely_pathogenic | 0.8549 | pathogenic | -0.871 | Destabilizing | 0.015 | N | 0.301 | neutral | N | 0.487593826 | None | None | N |
F/M | 0.6102 | likely_pathogenic | 0.6178 | pathogenic | -0.7 | Destabilizing | 0.579 | D | 0.321 | neutral | None | None | None | None | N |
F/N | 0.8839 | likely_pathogenic | 0.8766 | pathogenic | -1.209 | Destabilizing | 0.997 | D | 0.681 | prob.neutral | None | None | None | None | N |
F/P | 0.9963 | likely_pathogenic | 0.9961 | pathogenic | -1.216 | Destabilizing | 0.997 | D | 0.683 | prob.neutral | None | None | None | None | N |
F/Q | 0.9288 | likely_pathogenic | 0.9252 | pathogenic | -1.183 | Destabilizing | 0.991 | D | 0.683 | prob.neutral | None | None | None | None | N |
F/R | 0.9156 | likely_pathogenic | 0.9121 | pathogenic | -0.582 | Destabilizing | 0.991 | D | 0.683 | prob.neutral | None | None | None | None | N |
F/S | 0.7488 | likely_pathogenic | 0.7639 | pathogenic | -2.061 | Highly Destabilizing | 0.988 | D | 0.678 | prob.neutral | N | 0.500811053 | None | None | N |
F/T | 0.7872 | likely_pathogenic | 0.7961 | pathogenic | -1.851 | Destabilizing | 0.939 | D | 0.674 | neutral | None | None | None | None | N |
F/V | 0.3219 | likely_benign | 0.3315 | benign | -1.216 | Destabilizing | 0.134 | N | 0.406 | neutral | N | 0.493845008 | None | None | N |
F/W | 0.6417 | likely_pathogenic | 0.6468 | pathogenic | 0.014 | Stabilizing | 0.999 | D | 0.603 | neutral | None | None | None | None | N |
F/Y | 0.2806 | likely_benign | 0.2749 | benign | -0.237 | Destabilizing | 0.986 | D | 0.581 | neutral | N | 0.503235282 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.