Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7940 | 24043;24044;24045 | chr2:178719674;178719673;178719672 | chr2:179584401;179584400;179584399 |
N2AB | 7623 | 23092;23093;23094 | chr2:178719674;178719673;178719672 | chr2:179584401;179584400;179584399 |
N2A | 6696 | 20311;20312;20313 | chr2:178719674;178719673;178719672 | chr2:179584401;179584400;179584399 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/N | None | None | 0.033 | N | 0.427 | 0.131 | 0.461058313273 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/V | None | None | None | N | 0.079 | 0.129 | 0.159798565429 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.1432 | likely_benign | 0.1818 | benign | -0.61 | Destabilizing | None | N | 0.125 | neutral | None | None | None | None | N |
I/C | 0.3898 | ambiguous | 0.4289 | ambiguous | -0.681 | Destabilizing | 0.245 | N | 0.261 | neutral | None | None | None | None | N |
I/D | 0.3164 | likely_benign | 0.3512 | ambiguous | 0.055 | Stabilizing | 0.009 | N | 0.353 | neutral | None | None | None | None | N |
I/E | 0.2486 | likely_benign | 0.2682 | benign | -0.012 | Destabilizing | None | N | 0.198 | neutral | None | None | None | None | N |
I/F | 0.0757 | likely_benign | 0.0839 | benign | -0.51 | Destabilizing | None | N | 0.072 | neutral | N | 0.422139625 | None | None | N |
I/G | 0.285 | likely_benign | 0.352 | ambiguous | -0.785 | Destabilizing | 0.009 | N | 0.325 | neutral | None | None | None | None | N |
I/H | 0.1805 | likely_benign | 0.1863 | benign | None | Stabilizing | 0.497 | N | 0.389 | neutral | None | None | None | None | N |
I/K | 0.154 | likely_benign | 0.152 | benign | -0.318 | Destabilizing | None | N | 0.196 | neutral | None | None | None | None | N |
I/L | 0.0693 | likely_benign | 0.0771 | benign | -0.266 | Destabilizing | None | N | 0.074 | neutral | N | 0.434183416 | None | None | N |
I/M | 0.0706 | likely_benign | 0.0793 | benign | -0.45 | Destabilizing | 0.108 | N | 0.24 | neutral | N | 0.497290745 | None | None | N |
I/N | 0.1062 | likely_benign | 0.1169 | benign | -0.198 | Destabilizing | 0.033 | N | 0.427 | neutral | N | 0.459463076 | None | None | N |
I/P | 0.5773 | likely_pathogenic | 0.6256 | pathogenic | -0.348 | Destabilizing | None | N | 0.208 | neutral | None | None | None | None | N |
I/Q | 0.1507 | likely_benign | 0.1609 | benign | -0.355 | Destabilizing | 0.044 | N | 0.459 | neutral | None | None | None | None | N |
I/R | 0.1052 | likely_benign | 0.1048 | benign | 0.175 | Stabilizing | 0.022 | N | 0.429 | neutral | None | None | None | None | N |
I/S | 0.1075 | likely_benign | 0.1204 | benign | -0.688 | Destabilizing | None | N | 0.144 | neutral | N | 0.409188971 | None | None | N |
I/T | 0.0997 | likely_benign | 0.1228 | benign | -0.642 | Destabilizing | None | N | 0.124 | neutral | N | 0.413325354 | None | None | N |
I/V | 0.0679 | likely_benign | 0.0751 | benign | -0.348 | Destabilizing | None | N | 0.079 | neutral | N | 0.415885657 | None | None | N |
I/W | 0.3919 | ambiguous | 0.4456 | ambiguous | -0.536 | Destabilizing | 0.788 | D | 0.362 | neutral | None | None | None | None | N |
I/Y | 0.2329 | likely_benign | 0.2416 | benign | -0.296 | Destabilizing | 0.022 | N | 0.362 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.