Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7942 | 24049;24050;24051 | chr2:178719668;178719667;178719666 | chr2:179584395;179584394;179584393 |
N2AB | 7625 | 23098;23099;23100 | chr2:178719668;178719667;178719666 | chr2:179584395;179584394;179584393 |
N2A | 6698 | 20317;20318;20319 | chr2:178719668;178719667;178719666 | chr2:179584395;179584394;179584393 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs780339774 | 0.605 | 0.005 | D | 0.196 | 0.115 | 0.260249123532 | gnomAD-2.1.1 | 4.02E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.26797E-04 | None | 0 | 0 | 0 |
K/E | rs780339774 | 0.605 | 0.005 | D | 0.196 | 0.115 | 0.260249123532 | gnomAD-4.0.0 | 2.18951E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 3.70989E-04 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3214 | likely_benign | 0.4218 | ambiguous | -0.486 | Destabilizing | 0.016 | N | 0.401 | neutral | None | None | None | None | N |
K/C | 0.6494 | likely_pathogenic | 0.7544 | pathogenic | -0.662 | Destabilizing | 0.864 | D | 0.451 | neutral | None | None | None | None | N |
K/D | 0.3109 | likely_benign | 0.4038 | ambiguous | 0.288 | Stabilizing | None | N | 0.201 | neutral | None | None | None | None | N |
K/E | 0.1591 | likely_benign | 0.1906 | benign | 0.432 | Stabilizing | 0.005 | N | 0.196 | neutral | D | 0.523514554 | None | None | N |
K/F | 0.8105 | likely_pathogenic | 0.8666 | pathogenic | -0.212 | Destabilizing | 0.628 | D | 0.473 | neutral | None | None | None | None | N |
K/G | 0.2443 | likely_benign | 0.3029 | benign | -0.839 | Destabilizing | 0.016 | N | 0.437 | neutral | None | None | None | None | N |
K/H | 0.1862 | likely_benign | 0.2447 | benign | -0.916 | Destabilizing | 0.214 | N | 0.447 | neutral | None | None | None | None | N |
K/I | 0.6459 | likely_pathogenic | 0.7425 | pathogenic | 0.425 | Stabilizing | 0.295 | N | 0.497 | neutral | D | 0.531437627 | None | None | N |
K/L | 0.4561 | ambiguous | 0.5624 | ambiguous | 0.425 | Stabilizing | 0.072 | N | 0.469 | neutral | None | None | None | None | N |
K/M | 0.2852 | likely_benign | 0.344 | ambiguous | 0.02 | Stabilizing | 0.356 | N | 0.439 | neutral | None | None | None | None | N |
K/N | 0.1535 | likely_benign | 0.2095 | benign | -0.388 | Destabilizing | None | N | 0.143 | neutral | N | 0.448267434 | None | None | N |
K/P | 0.8256 | likely_pathogenic | 0.8832 | pathogenic | 0.151 | Stabilizing | 0.136 | N | 0.477 | neutral | None | None | None | None | N |
K/Q | 0.1182 | likely_benign | 0.1343 | benign | -0.311 | Destabilizing | 0.001 | N | 0.149 | neutral | D | 0.533635547 | None | None | N |
K/R | 0.0795 | likely_benign | 0.0849 | benign | -0.258 | Destabilizing | None | N | 0.116 | neutral | N | 0.510452043 | None | None | N |
K/S | 0.2464 | likely_benign | 0.328 | benign | -1.065 | Destabilizing | 0.016 | N | 0.265 | neutral | None | None | None | None | N |
K/T | 0.1915 | likely_benign | 0.2468 | benign | -0.699 | Destabilizing | 0.012 | N | 0.413 | neutral | N | 0.501024484 | None | None | N |
K/V | 0.5629 | ambiguous | 0.6641 | pathogenic | 0.151 | Stabilizing | 0.072 | N | 0.478 | neutral | None | None | None | None | N |
K/W | 0.7425 | likely_pathogenic | 0.8145 | pathogenic | -0.142 | Destabilizing | 0.864 | D | 0.479 | neutral | None | None | None | None | N |
K/Y | 0.5073 | ambiguous | 0.6049 | pathogenic | 0.177 | Stabilizing | 0.356 | N | 0.473 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.