Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7944 | 24055;24056;24057 | chr2:178719662;178719661;178719660 | chr2:179584389;179584388;179584387 |
N2AB | 7627 | 23104;23105;23106 | chr2:178719662;178719661;178719660 | chr2:179584389;179584388;179584387 |
N2A | 6700 | 20323;20324;20325 | chr2:178719662;178719661;178719660 | chr2:179584389;179584388;179584387 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/P | None | None | 0.984 | N | 0.782 | 0.309 | 0.236278675362 | gnomAD-4.0.0 | 1.59137E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43279E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6733 | likely_pathogenic | 0.682 | pathogenic | -0.47 | Destabilizing | 0.076 | N | 0.487 | neutral | None | None | None | None | N |
A/D | 0.9584 | likely_pathogenic | 0.9645 | pathogenic | -1.599 | Destabilizing | 0.968 | D | 0.779 | deleterious | N | 0.462226254 | None | None | N |
A/E | 0.9321 | likely_pathogenic | 0.9416 | pathogenic | -1.348 | Destabilizing | 0.976 | D | 0.786 | deleterious | None | None | None | None | N |
A/F | 0.7268 | likely_pathogenic | 0.7403 | pathogenic | -0.214 | Destabilizing | 0.996 | D | 0.778 | deleterious | None | None | None | None | N |
A/G | 0.3194 | likely_benign | 0.3424 | ambiguous | -0.952 | Destabilizing | 0.811 | D | 0.729 | prob.delet. | N | 0.466060108 | None | None | N |
A/H | 0.943 | likely_pathogenic | 0.9474 | pathogenic | -1.72 | Destabilizing | 0.999 | D | 0.771 | deleterious | None | None | None | None | N |
A/I | 0.5718 | likely_pathogenic | 0.6342 | pathogenic | 1.026 | Stabilizing | 0.988 | D | 0.785 | deleterious | None | None | None | None | N |
A/K | 0.9808 | likely_pathogenic | 0.985 | pathogenic | -0.315 | Destabilizing | 0.976 | D | 0.785 | deleterious | None | None | None | None | N |
A/L | 0.5356 | ambiguous | 0.5737 | pathogenic | 1.026 | Stabilizing | 0.919 | D | 0.786 | deleterious | None | None | None | None | N |
A/M | 0.5771 | likely_pathogenic | 0.6336 | pathogenic | 0.579 | Stabilizing | 0.999 | D | 0.767 | deleterious | None | None | None | None | N |
A/N | 0.899 | likely_pathogenic | 0.9099 | pathogenic | -0.741 | Destabilizing | 0.976 | D | 0.771 | deleterious | None | None | None | None | N |
A/P | 0.9683 | likely_pathogenic | 0.9688 | pathogenic | 0.59 | Stabilizing | 0.984 | D | 0.782 | deleterious | N | 0.468720714 | None | None | N |
A/Q | 0.917 | likely_pathogenic | 0.9232 | pathogenic | -0.406 | Destabilizing | 0.988 | D | 0.793 | deleterious | None | None | None | None | N |
A/R | 0.9622 | likely_pathogenic | 0.9667 | pathogenic | -0.816 | Destabilizing | 0.976 | D | 0.793 | deleterious | None | None | None | None | N |
A/S | 0.1711 | likely_benign | 0.1767 | benign | -1.15 | Destabilizing | 0.046 | N | 0.472 | neutral | N | 0.401931272 | None | None | N |
A/T | 0.2003 | likely_benign | 0.241 | benign | -0.747 | Destabilizing | 0.811 | D | 0.739 | prob.delet. | N | 0.482258925 | None | None | N |
A/V | 0.2762 | likely_benign | 0.3208 | benign | 0.59 | Stabilizing | 0.896 | D | 0.741 | deleterious | N | 0.455083003 | None | None | N |
A/W | 0.9667 | likely_pathogenic | 0.9675 | pathogenic | -1.094 | Destabilizing | 0.999 | D | 0.797 | deleterious | None | None | None | None | N |
A/Y | 0.8801 | likely_pathogenic | 0.8844 | pathogenic | -0.391 | Destabilizing | 0.996 | D | 0.787 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.