Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7950 | 24073;24074;24075 | chr2:178719644;178719643;178719642 | chr2:179584371;179584370;179584369 |
N2AB | 7633 | 23122;23123;23124 | chr2:178719644;178719643;178719642 | chr2:179584371;179584370;179584369 |
N2A | 6706 | 20341;20342;20343 | chr2:178719644;178719643;178719642 | chr2:179584371;179584370;179584369 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/S | None | None | None | N | 0.079 | 0.127 | 0.0482279557977 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.1032 | likely_benign | 0.1173 | benign | -1.459 | Destabilizing | None | N | 0.061 | neutral | None | None | None | None | N |
C/D | 0.1502 | likely_benign | 0.1741 | benign | -0.164 | Destabilizing | 0.009 | N | 0.335 | neutral | None | None | None | None | N |
C/E | 0.2557 | likely_benign | 0.2972 | benign | -0.11 | Destabilizing | None | N | 0.163 | neutral | None | None | None | None | N |
C/F | 0.0722 | likely_benign | 0.077 | benign | -0.935 | Destabilizing | 0.033 | N | 0.451 | neutral | N | 0.416458007 | None | None | N |
C/G | 0.0721 | likely_benign | 0.077 | benign | -1.725 | Destabilizing | 0.003 | N | 0.273 | neutral | N | 0.375302031 | None | None | N |
C/H | 0.1021 | likely_benign | 0.1201 | benign | -1.69 | Destabilizing | 0.245 | N | 0.417 | neutral | None | None | None | None | N |
C/I | 0.1759 | likely_benign | 0.2052 | benign | -0.8 | Destabilizing | 0.009 | N | 0.302 | neutral | None | None | None | None | N |
C/K | 0.2158 | likely_benign | 0.2612 | benign | -0.825 | Destabilizing | 0.009 | N | 0.333 | neutral | None | None | None | None | N |
C/L | 0.155 | likely_benign | 0.1638 | benign | -0.8 | Destabilizing | 0.001 | N | 0.228 | neutral | None | None | None | None | N |
C/M | 0.2482 | likely_benign | 0.2648 | benign | 0.029 | Stabilizing | 0.002 | N | 0.194 | neutral | None | None | None | None | N |
C/N | 0.0972 | likely_benign | 0.1129 | benign | -0.652 | Destabilizing | 0.009 | N | 0.345 | neutral | None | None | None | None | N |
C/P | 0.5131 | ambiguous | 0.601 | pathogenic | -0.993 | Destabilizing | 0.044 | N | 0.422 | neutral | None | None | None | None | N |
C/Q | 0.1638 | likely_benign | 0.1894 | benign | -0.663 | Destabilizing | 0.044 | N | 0.417 | neutral | None | None | None | None | N |
C/R | 0.0958 | likely_benign | 0.1119 | benign | -0.545 | Destabilizing | 0.033 | N | 0.423 | neutral | N | 0.33534092 | None | None | N |
C/S | 0.0687 | likely_benign | 0.0761 | benign | -1.195 | Destabilizing | None | N | 0.079 | neutral | N | 0.262304599 | None | None | N |
C/T | 0.1152 | likely_benign | 0.1333 | benign | -0.977 | Destabilizing | 0.004 | N | 0.239 | neutral | None | None | None | None | N |
C/V | 0.1623 | likely_benign | 0.1775 | benign | -0.993 | Destabilizing | 0.004 | N | 0.291 | neutral | None | None | None | None | N |
C/W | 0.1641 | likely_benign | 0.1785 | benign | -0.887 | Destabilizing | 0.737 | D | 0.361 | neutral | N | 0.464673242 | None | None | N |
C/Y | 0.0732 | likely_benign | 0.0819 | benign | -0.878 | Destabilizing | 0.065 | N | 0.415 | neutral | N | 0.3996804 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.