Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7952 | 24079;24080;24081 | chr2:178719638;178719637;178719636 | chr2:179584365;179584364;179584363 |
N2AB | 7635 | 23128;23129;23130 | chr2:178719638;178719637;178719636 | chr2:179584365;179584364;179584363 |
N2A | 6708 | 20347;20348;20349 | chr2:178719638;178719637;178719636 | chr2:179584365;179584364;179584363 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs752227139 | 0.247 | 0.977 | N | 0.505 | 0.32 | 0.402899589544 | gnomAD-2.1.1 | 1.79E-05 | None | None | None | None | N | None | 4.13E-05 | 0 | None | 0 | 0 | None | 6.54E-05 | None | 0 | 1.56E-05 | 0 |
E/K | rs752227139 | 0.247 | 0.977 | N | 0.505 | 0.32 | 0.402899589544 | gnomAD-3.1.2 | 4.6E-05 | None | None | None | None | N | None | 4.83E-05 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 4.41E-05 | 0 | 4.77555E-04 |
E/K | rs752227139 | 0.247 | 0.977 | N | 0.505 | 0.32 | 0.402899589544 | gnomAD-4.0.0 | 4.15235E-05 | None | None | None | None | N | None | 2.6718E-05 | 5.00183E-05 | None | 0 | 2.22856E-05 | None | 0 | 0 | 4.5773E-05 | 3.29417E-05 | 6.40471E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1236 | likely_benign | 0.1372 | benign | -0.41 | Destabilizing | 0.939 | D | 0.493 | neutral | N | 0.487268539 | None | None | N |
E/C | 0.7908 | likely_pathogenic | 0.8234 | pathogenic | 0.063 | Stabilizing | 0.999 | D | 0.743 | deleterious | None | None | None | None | N |
E/D | 0.112 | likely_benign | 0.121 | benign | -0.371 | Destabilizing | 0.02 | N | 0.153 | neutral | N | 0.479091773 | None | None | N |
E/F | 0.6682 | likely_pathogenic | 0.7051 | pathogenic | -0.321 | Destabilizing | 0.999 | D | 0.711 | prob.delet. | None | None | None | None | N |
E/G | 0.1058 | likely_benign | 0.1199 | benign | -0.632 | Destabilizing | 0.939 | D | 0.539 | neutral | N | 0.505643656 | None | None | N |
E/H | 0.3532 | ambiguous | 0.3867 | ambiguous | -0.247 | Destabilizing | 0.998 | D | 0.503 | neutral | None | None | None | None | N |
E/I | 0.359 | ambiguous | 0.4004 | ambiguous | 0.144 | Stabilizing | 0.993 | D | 0.722 | prob.delet. | None | None | None | None | N |
E/K | 0.0945 | likely_benign | 0.1085 | benign | 0.251 | Stabilizing | 0.977 | D | 0.505 | neutral | N | 0.463428888 | None | None | N |
E/L | 0.3216 | likely_benign | 0.368 | ambiguous | 0.144 | Stabilizing | 0.993 | D | 0.681 | prob.neutral | None | None | None | None | N |
E/M | 0.3852 | ambiguous | 0.421 | ambiguous | 0.38 | Stabilizing | 0.999 | D | 0.673 | neutral | None | None | None | None | N |
E/N | 0.1786 | likely_benign | 0.2055 | benign | -0.035 | Destabilizing | 0.973 | D | 0.503 | neutral | None | None | None | None | N |
E/P | 0.8105 | likely_pathogenic | 0.8451 | pathogenic | -0.02 | Destabilizing | 0.993 | D | 0.591 | neutral | None | None | None | None | N |
E/Q | 0.1101 | likely_benign | 0.1191 | benign | 0.012 | Stabilizing | 0.778 | D | 0.252 | neutral | N | 0.459735221 | None | None | N |
E/R | 0.1656 | likely_benign | 0.182 | benign | 0.408 | Stabilizing | 0.986 | D | 0.524 | neutral | None | None | None | None | N |
E/S | 0.1471 | likely_benign | 0.1633 | benign | -0.223 | Destabilizing | 0.953 | D | 0.468 | neutral | None | None | None | None | N |
E/T | 0.1761 | likely_benign | 0.1999 | benign | -0.044 | Destabilizing | 0.986 | D | 0.532 | neutral | None | None | None | None | N |
E/V | 0.1925 | likely_benign | 0.2121 | benign | -0.02 | Destabilizing | 0.991 | D | 0.637 | neutral | N | 0.508683962 | None | None | N |
E/W | 0.8484 | likely_pathogenic | 0.8738 | pathogenic | -0.187 | Destabilizing | 0.999 | D | 0.735 | prob.delet. | None | None | None | None | N |
E/Y | 0.5449 | ambiguous | 0.5866 | pathogenic | -0.084 | Destabilizing | 0.998 | D | 0.685 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.