Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7953 | 24082;24083;24084 | chr2:178719635;178719634;178719633 | chr2:179584362;179584361;179584360 |
N2AB | 7636 | 23131;23132;23133 | chr2:178719635;178719634;178719633 | chr2:179584362;179584361;179584360 |
N2A | 6709 | 20350;20351;20352 | chr2:178719635;178719634;178719633 | chr2:179584362;179584361;179584360 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/I | rs1218890532 | 0.543 | 0.784 | N | 0.18 | 0.144 | 0.301455362545 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 1.65837E-04 |
M/I | rs1218890532 | 0.543 | 0.784 | N | 0.18 | 0.144 | 0.301455362545 | gnomAD-4.0.0 | 1.36846E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.31334E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.1824 | likely_benign | 0.1886 | benign | -0.561 | Destabilizing | 0.3 | N | 0.189 | neutral | None | None | None | None | I |
M/C | 0.6694 | likely_pathogenic | 0.6878 | pathogenic | -0.382 | Destabilizing | 0.981 | D | 0.215 | neutral | None | None | None | None | I |
M/D | 0.4522 | ambiguous | 0.4614 | ambiguous | 0.263 | Stabilizing | 0.329 | N | 0.276 | neutral | None | None | None | None | I |
M/E | 0.2255 | likely_benign | 0.2392 | benign | 0.205 | Stabilizing | 0.329 | N | 0.178 | neutral | None | None | None | None | I |
M/F | 0.2378 | likely_benign | 0.2483 | benign | -0.242 | Destabilizing | 0.981 | D | 0.227 | neutral | None | None | None | None | I |
M/G | 0.3307 | likely_benign | 0.3524 | ambiguous | -0.739 | Destabilizing | 0.495 | N | 0.192 | neutral | None | None | None | None | I |
M/H | 0.3119 | likely_benign | 0.331 | benign | 0.061 | Stabilizing | 0.944 | D | 0.26 | neutral | None | None | None | None | I |
M/I | 0.1576 | likely_benign | 0.1579 | benign | -0.187 | Destabilizing | 0.784 | D | 0.18 | neutral | N | 0.419170238 | None | None | I |
M/K | 0.0928 | likely_benign | 0.1009 | benign | 0.379 | Stabilizing | 0.001 | N | 0.105 | neutral | N | 0.343325685 | None | None | I |
M/L | 0.0954 | likely_benign | 0.0985 | benign | -0.187 | Destabilizing | 0.244 | N | 0.135 | neutral | N | 0.361140655 | None | None | I |
M/N | 0.2158 | likely_benign | 0.2143 | benign | 0.571 | Stabilizing | 0.013 | N | 0.107 | neutral | None | None | None | None | I |
M/P | 0.2184 | likely_benign | 0.224 | benign | -0.283 | Destabilizing | 0.828 | D | 0.357 | neutral | None | None | None | None | I |
M/Q | 0.1499 | likely_benign | 0.16 | benign | 0.382 | Stabilizing | 0.704 | D | 0.145 | neutral | None | None | None | None | I |
M/R | 0.1035 | likely_benign | 0.1095 | benign | 0.882 | Stabilizing | 0.001 | N | 0.093 | neutral | N | 0.388519257 | None | None | I |
M/S | 0.221 | likely_benign | 0.2306 | benign | 0.101 | Stabilizing | 0.495 | N | 0.182 | neutral | None | None | None | None | I |
M/T | 0.1307 | likely_benign | 0.1374 | benign | 0.144 | Stabilizing | 0.425 | N | 0.24 | neutral | N | 0.409742678 | None | None | I |
M/V | 0.0764 | likely_benign | 0.0766 | benign | -0.283 | Destabilizing | 0.6 | D | 0.162 | neutral | N | 0.399082968 | None | None | I |
M/W | 0.4673 | ambiguous | 0.5024 | ambiguous | -0.2 | Destabilizing | 0.995 | D | 0.221 | neutral | None | None | None | None | I |
M/Y | 0.3618 | ambiguous | 0.3824 | ambiguous | -0.057 | Destabilizing | 0.981 | D | 0.291 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.