Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7961 | 24106;24107;24108 | chr2:178719611;178719610;178719609 | chr2:179584338;179584337;179584336 |
N2AB | 7644 | 23155;23156;23157 | chr2:178719611;178719610;178719609 | chr2:179584338;179584337;179584336 |
N2A | 6717 | 20374;20375;20376 | chr2:178719611;178719610;178719609 | chr2:179584338;179584337;179584336 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | None | None | 0.035 | N | 0.447 | 0.184 | 0.107399877778 | gnomAD-4.0.0 | 6.84365E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99688E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.9804 | likely_pathogenic | 0.9803 | pathogenic | -2.954 | Highly Destabilizing | 0.939 | D | 0.786 | deleterious | None | None | None | None | N |
F/C | 0.8363 | likely_pathogenic | 0.8773 | pathogenic | -1.588 | Destabilizing | 0.035 | N | 0.671 | neutral | N | 0.32250683 | None | None | N |
F/D | 0.9997 | likely_pathogenic | 0.9996 | pathogenic | -3.613 | Highly Destabilizing | 0.997 | D | 0.87 | deleterious | None | None | None | None | N |
F/E | 0.9995 | likely_pathogenic | 0.9994 | pathogenic | -3.395 | Highly Destabilizing | 0.997 | D | 0.869 | deleterious | None | None | None | None | N |
F/G | 0.9947 | likely_pathogenic | 0.9947 | pathogenic | -3.389 | Highly Destabilizing | 0.991 | D | 0.837 | deleterious | None | None | None | None | N |
F/H | 0.9962 | likely_pathogenic | 0.9957 | pathogenic | -2.091 | Highly Destabilizing | 0.999 | D | 0.793 | deleterious | None | None | None | None | N |
F/I | 0.7833 | likely_pathogenic | 0.8129 | pathogenic | -1.51 | Destabilizing | 0.852 | D | 0.716 | prob.delet. | N | 0.45493625 | None | None | N |
F/K | 0.9994 | likely_pathogenic | 0.9993 | pathogenic | -2.128 | Highly Destabilizing | 0.997 | D | 0.869 | deleterious | None | None | None | None | N |
F/L | 0.9652 | likely_pathogenic | 0.9677 | pathogenic | -1.51 | Destabilizing | 0.035 | N | 0.447 | neutral | N | 0.473444653 | None | None | N |
F/M | 0.8946 | likely_pathogenic | 0.9026 | pathogenic | -1.104 | Destabilizing | 0.982 | D | 0.703 | prob.neutral | None | None | None | None | N |
F/N | 0.9986 | likely_pathogenic | 0.9982 | pathogenic | -2.703 | Highly Destabilizing | 0.997 | D | 0.876 | deleterious | None | None | None | None | N |
F/P | 0.9999 | likely_pathogenic | 0.9998 | pathogenic | -2.006 | Highly Destabilizing | 0.997 | D | 0.872 | deleterious | None | None | None | None | N |
F/Q | 0.9985 | likely_pathogenic | 0.9984 | pathogenic | -2.625 | Highly Destabilizing | 0.997 | D | 0.881 | deleterious | None | None | None | None | N |
F/R | 0.997 | likely_pathogenic | 0.9967 | pathogenic | -1.723 | Destabilizing | 0.997 | D | 0.875 | deleterious | None | None | None | None | N |
F/S | 0.9927 | likely_pathogenic | 0.9919 | pathogenic | -3.217 | Highly Destabilizing | 0.988 | D | 0.812 | deleterious | N | 0.48086026 | None | None | N |
F/T | 0.9919 | likely_pathogenic | 0.9906 | pathogenic | -2.889 | Highly Destabilizing | 0.969 | D | 0.811 | deleterious | None | None | None | None | N |
F/V | 0.7195 | likely_pathogenic | 0.745 | pathogenic | -2.006 | Highly Destabilizing | 0.852 | D | 0.75 | deleterious | N | 0.448586281 | None | None | N |
F/W | 0.9535 | likely_pathogenic | 0.9543 | pathogenic | -0.609 | Destabilizing | 0.999 | D | 0.685 | prob.neutral | None | None | None | None | N |
F/Y | 0.7551 | likely_pathogenic | 0.7366 | pathogenic | -1.021 | Destabilizing | 0.986 | D | 0.658 | neutral | N | 0.48086026 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.