Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7963 | 24112;24113;24114 | chr2:178719605;178719604;178719603 | chr2:179584332;179584331;179584330 |
N2AB | 7646 | 23161;23162;23163 | chr2:178719605;178719604;178719603 | chr2:179584332;179584331;179584330 |
N2A | 6719 | 20380;20381;20382 | chr2:178719605;178719604;178719603 | chr2:179584332;179584331;179584330 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | rs1444280524 | -1.255 | 0.998 | D | 0.763 | 0.523 | 0.683767819358 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
V/M | rs1444280524 | -1.255 | 0.998 | D | 0.763 | 0.523 | 0.683767819358 | gnomAD-4.0.0 | 1.36895E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.51953E-05 | None | 0 | 0 | 0 | 1.16004E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.7113 | likely_pathogenic | 0.6774 | pathogenic | -2.339 | Highly Destabilizing | 0.543 | D | 0.351 | neutral | N | 0.427979802 | None | None | N |
V/C | 0.9733 | likely_pathogenic | 0.9724 | pathogenic | -2.098 | Highly Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
V/D | 0.9938 | likely_pathogenic | 0.9943 | pathogenic | -3.19 | Highly Destabilizing | 0.999 | D | 0.887 | deleterious | None | None | None | None | N |
V/E | 0.98 | likely_pathogenic | 0.9802 | pathogenic | -2.928 | Highly Destabilizing | 0.998 | D | 0.867 | deleterious | D | 0.559437519 | None | None | N |
V/F | 0.8615 | likely_pathogenic | 0.8406 | pathogenic | -1.255 | Destabilizing | 0.999 | D | 0.843 | deleterious | None | None | None | None | N |
V/G | 0.8179 | likely_pathogenic | 0.8223 | pathogenic | -2.903 | Highly Destabilizing | 0.997 | D | 0.845 | deleterious | N | 0.514581729 | None | None | N |
V/H | 0.9979 | likely_pathogenic | 0.9979 | pathogenic | -2.608 | Highly Destabilizing | 1.0 | D | 0.864 | deleterious | None | None | None | None | N |
V/I | 0.1128 | likely_benign | 0.111 | benign | -0.729 | Destabilizing | 0.611 | D | 0.279 | neutral | None | None | None | None | N |
V/K | 0.9917 | likely_pathogenic | 0.9922 | pathogenic | -1.848 | Destabilizing | 0.999 | D | 0.863 | deleterious | None | None | None | None | N |
V/L | 0.6597 | likely_pathogenic | 0.6222 | pathogenic | -0.729 | Destabilizing | 0.948 | D | 0.621 | neutral | N | 0.512162192 | None | None | N |
V/M | 0.6719 | likely_pathogenic | 0.6353 | pathogenic | -1.088 | Destabilizing | 0.998 | D | 0.763 | deleterious | D | 0.54766314 | None | None | N |
V/N | 0.9849 | likely_pathogenic | 0.9856 | pathogenic | -2.348 | Highly Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
V/P | 0.9971 | likely_pathogenic | 0.9964 | pathogenic | -1.243 | Destabilizing | 0.999 | D | 0.87 | deleterious | None | None | None | None | N |
V/Q | 0.9872 | likely_pathogenic | 0.9866 | pathogenic | -2.112 | Highly Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
V/R | 0.9861 | likely_pathogenic | 0.986 | pathogenic | -1.771 | Destabilizing | 0.999 | D | 0.882 | deleterious | None | None | None | None | N |
V/S | 0.9434 | likely_pathogenic | 0.9376 | pathogenic | -2.936 | Highly Destabilizing | 0.995 | D | 0.841 | deleterious | None | None | None | None | N |
V/T | 0.8628 | likely_pathogenic | 0.8518 | pathogenic | -2.526 | Highly Destabilizing | 0.992 | D | 0.704 | prob.neutral | None | None | None | None | N |
V/W | 0.9974 | likely_pathogenic | 0.9972 | pathogenic | -1.783 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
V/Y | 0.9852 | likely_pathogenic | 0.984 | pathogenic | -1.469 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.