Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7965 | 24118;24119;24120 | chr2:178719599;178719598;178719597 | chr2:179584326;179584325;179584324 |
N2AB | 7648 | 23167;23168;23169 | chr2:178719599;178719598;178719597 | chr2:179584326;179584325;179584324 |
N2A | 6721 | 20386;20387;20388 | chr2:178719599;178719598;178719597 | chr2:179584326;179584325;179584324 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | None | None | 0.999 | D | 0.603 | 0.589 | 0.407357902709 | gnomAD-4.0.0 | 3.42398E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.50175E-06 | 0 | 0 |
N/K | rs1363515138 | None | 1.0 | D | 0.733 | 0.483 | 0.240491677333 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
N/K | rs1363515138 | None | 1.0 | D | 0.733 | 0.483 | 0.240491677333 | gnomAD-4.0.0 | 1.3146E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.94048E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.9951 | likely_pathogenic | 0.9954 | pathogenic | -0.777 | Destabilizing | 1.0 | D | 0.76 | deleterious | None | None | None | None | N |
N/C | 0.9829 | likely_pathogenic | 0.9854 | pathogenic | -0.202 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | N |
N/D | 0.9606 | likely_pathogenic | 0.9703 | pathogenic | -1.214 | Destabilizing | 0.999 | D | 0.603 | neutral | D | 0.530698433 | None | None | N |
N/E | 0.9972 | likely_pathogenic | 0.9973 | pathogenic | -1.168 | Destabilizing | 0.999 | D | 0.711 | prob.delet. | None | None | None | None | N |
N/F | 0.9994 | likely_pathogenic | 0.9995 | pathogenic | -0.958 | Destabilizing | 1.0 | D | 0.758 | deleterious | None | None | None | None | N |
N/G | 0.9829 | likely_pathogenic | 0.9849 | pathogenic | -1.019 | Destabilizing | 0.999 | D | 0.544 | neutral | None | None | None | None | N |
N/H | 0.9756 | likely_pathogenic | 0.9801 | pathogenic | -0.909 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | D | 0.563895204 | None | None | N |
N/I | 0.9938 | likely_pathogenic | 0.9946 | pathogenic | -0.192 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | D | 0.564148693 | None | None | N |
N/K | 0.9981 | likely_pathogenic | 0.9984 | pathogenic | -0.119 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | D | 0.545283969 | None | None | N |
N/L | 0.9926 | likely_pathogenic | 0.9936 | pathogenic | -0.192 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
N/M | 0.9939 | likely_pathogenic | 0.9953 | pathogenic | 0.406 | Stabilizing | 1.0 | D | 0.742 | deleterious | None | None | None | None | N |
N/P | 0.9983 | likely_pathogenic | 0.9981 | pathogenic | -0.361 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | N |
N/Q | 0.9979 | likely_pathogenic | 0.9982 | pathogenic | -1.023 | Destabilizing | 1.0 | D | 0.744 | deleterious | None | None | None | None | N |
N/R | 0.9979 | likely_pathogenic | 0.9979 | pathogenic | 0.077 | Stabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
N/S | 0.8426 | likely_pathogenic | 0.8671 | pathogenic | -0.708 | Destabilizing | 0.999 | D | 0.567 | neutral | N | 0.518163586 | None | None | N |
N/T | 0.9475 | likely_pathogenic | 0.9609 | pathogenic | -0.509 | Destabilizing | 0.999 | D | 0.701 | prob.neutral | D | 0.54477699 | None | None | N |
N/V | 0.993 | likely_pathogenic | 0.9938 | pathogenic | -0.361 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
N/W | 0.9997 | likely_pathogenic | 0.9997 | pathogenic | -0.764 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | N |
N/Y | 0.9869 | likely_pathogenic | 0.9887 | pathogenic | -0.477 | Destabilizing | 1.0 | D | 0.748 | deleterious | D | 0.552538898 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.