Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7971 | 24136;24137;24138 | chr2:178719581;178719580;178719579 | chr2:179584308;179584307;179584306 |
N2AB | 7654 | 23185;23186;23187 | chr2:178719581;178719580;178719579 | chr2:179584308;179584307;179584306 |
N2A | 6727 | 20404;20405;20406 | chr2:178719581;178719580;178719579 | chr2:179584308;179584307;179584306 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | None | None | 0.012 | N | 0.305 | 0.215 | 0.15556083564 | gnomAD-4.0.0 | 1.3709E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80219E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1231 | likely_benign | 0.1385 | benign | -0.588 | Destabilizing | 0.007 | N | 0.367 | neutral | None | None | None | None | N |
N/C | 0.1775 | likely_benign | 0.2062 | benign | 0.221 | Stabilizing | 0.356 | N | 0.446 | neutral | None | None | None | None | N |
N/D | 0.0902 | likely_benign | 0.0877 | benign | -0.057 | Destabilizing | 0.012 | N | 0.339 | neutral | N | 0.459137789 | None | None | N |
N/E | 0.2402 | likely_benign | 0.2398 | benign | -0.042 | Destabilizing | None | N | 0.17 | neutral | None | None | None | None | N |
N/F | 0.2878 | likely_benign | 0.327 | benign | -0.669 | Destabilizing | 0.072 | N | 0.541 | neutral | None | None | None | None | N |
N/G | 0.1932 | likely_benign | 0.2022 | benign | -0.84 | Destabilizing | 0.016 | N | 0.277 | neutral | None | None | None | None | N |
N/H | 0.0789 | likely_benign | 0.0791 | benign | -0.761 | Destabilizing | 0.295 | N | 0.386 | neutral | N | 0.475992753 | None | None | N |
N/I | 0.1326 | likely_benign | 0.1528 | benign | 0.01 | Stabilizing | None | N | 0.418 | neutral | N | 0.468450705 | None | None | N |
N/K | 0.1867 | likely_benign | 0.1903 | benign | -0.089 | Destabilizing | 0.012 | N | 0.305 | neutral | N | 0.437818367 | None | None | N |
N/L | 0.141 | likely_benign | 0.1675 | benign | 0.01 | Stabilizing | None | N | 0.459 | neutral | None | None | None | None | N |
N/M | 0.231 | likely_benign | 0.2673 | benign | 0.4 | Stabilizing | 0.214 | N | 0.493 | neutral | None | None | None | None | N |
N/P | 0.6954 | likely_pathogenic | 0.696 | pathogenic | -0.161 | Destabilizing | 0.072 | N | 0.503 | neutral | None | None | None | None | N |
N/Q | 0.2057 | likely_benign | 0.2121 | benign | -0.573 | Destabilizing | 0.072 | N | 0.371 | neutral | None | None | None | None | N |
N/R | 0.182 | likely_benign | 0.1769 | benign | -0.064 | Destabilizing | 0.072 | N | 0.378 | neutral | None | None | None | None | N |
N/S | 0.0538 | likely_benign | 0.0576 | benign | -0.438 | Destabilizing | None | N | 0.125 | neutral | N | 0.302253507 | None | None | N |
N/T | 0.077 | likely_benign | 0.0904 | benign | -0.254 | Destabilizing | None | N | 0.133 | neutral | N | 0.370726583 | None | None | N |
N/V | 0.1385 | likely_benign | 0.1558 | benign | -0.161 | Destabilizing | 0.007 | N | 0.366 | neutral | None | None | None | None | N |
N/W | 0.5719 | likely_pathogenic | 0.5982 | pathogenic | -0.526 | Destabilizing | 0.864 | D | 0.468 | neutral | None | None | None | None | N |
N/Y | 0.1052 | likely_benign | 0.1199 | benign | -0.312 | Destabilizing | 0.295 | N | 0.565 | neutral | N | 0.472125729 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.