Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7973 | 24142;24143;24144 | chr2:178719575;178719574;178719573 | chr2:179584302;179584301;179584300 |
N2AB | 7656 | 23191;23192;23193 | chr2:178719575;178719574;178719573 | chr2:179584302;179584301;179584300 |
N2A | 6729 | 20410;20411;20412 | chr2:178719575;178719574;178719573 | chr2:179584302;179584301;179584300 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.027 | D | 0.441 | 0.121 | 0.190952846119 | gnomAD-4.0.0 | 1.59876E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77546E-05 | None | 0 | 0 | 0 | 0 | 0 |
T/I | rs768738299 | 0.054 | 0.317 | N | 0.657 | 0.336 | 0.459906663326 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
T/I | rs768738299 | 0.054 | 0.317 | N | 0.657 | 0.336 | 0.459906663326 | gnomAD-4.0.0 | 1.59921E-06 | None | None | None | None | N | None | 5.66829E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0782 | likely_benign | 0.0813 | benign | -0.523 | Destabilizing | 0.027 | N | 0.441 | neutral | D | 0.524554704 | None | None | N |
T/C | 0.394 | ambiguous | 0.4406 | ambiguous | -0.281 | Destabilizing | 0.824 | D | 0.596 | neutral | None | None | None | None | N |
T/D | 0.2795 | likely_benign | 0.3037 | benign | 0.193 | Stabilizing | 0.081 | N | 0.55 | neutral | None | None | None | None | N |
T/E | 0.2374 | likely_benign | 0.2458 | benign | 0.138 | Stabilizing | 0.035 | N | 0.504 | neutral | None | None | None | None | N |
T/F | 0.1918 | likely_benign | 0.2153 | benign | -0.924 | Destabilizing | 0.555 | D | 0.655 | neutral | None | None | None | None | N |
T/G | 0.26 | likely_benign | 0.2803 | benign | -0.691 | Destabilizing | 0.035 | N | 0.551 | neutral | None | None | None | None | N |
T/H | 0.2049 | likely_benign | 0.2225 | benign | -0.995 | Destabilizing | 0.001 | N | 0.503 | neutral | None | None | None | None | N |
T/I | 0.1479 | likely_benign | 0.1666 | benign | -0.195 | Destabilizing | 0.317 | N | 0.657 | neutral | N | 0.488481168 | None | None | N |
T/K | 0.1769 | likely_benign | 0.1849 | benign | -0.424 | Destabilizing | 0.001 | N | 0.319 | neutral | None | None | None | None | N |
T/L | 0.0999 | likely_benign | 0.1106 | benign | -0.195 | Destabilizing | 0.149 | N | 0.543 | neutral | None | None | None | None | N |
T/M | 0.0853 | likely_benign | 0.0875 | benign | 0.013 | Stabilizing | 0.791 | D | 0.614 | neutral | None | None | None | None | N |
T/N | 0.1166 | likely_benign | 0.123 | benign | -0.219 | Destabilizing | 0.002 | N | 0.257 | neutral | N | 0.492493639 | None | None | N |
T/P | 0.1824 | likely_benign | 0.1939 | benign | -0.274 | Destabilizing | 0.317 | N | 0.639 | neutral | N | 0.491786077 | None | None | N |
T/Q | 0.1953 | likely_benign | 0.1998 | benign | -0.42 | Destabilizing | 0.149 | N | 0.64 | neutral | None | None | None | None | N |
T/R | 0.1325 | likely_benign | 0.1293 | benign | -0.176 | Destabilizing | 0.081 | N | 0.567 | neutral | None | None | None | None | N |
T/S | 0.0915 | likely_benign | 0.0936 | benign | -0.463 | Destabilizing | None | N | 0.243 | neutral | N | 0.478992986 | None | None | N |
T/V | 0.1216 | likely_benign | 0.1348 | benign | -0.274 | Destabilizing | 0.149 | N | 0.519 | neutral | None | None | None | None | N |
T/W | 0.4969 | ambiguous | 0.5278 | ambiguous | -0.901 | Destabilizing | 0.935 | D | 0.64 | neutral | None | None | None | None | N |
T/Y | 0.2344 | likely_benign | 0.2648 | benign | -0.632 | Destabilizing | 0.38 | N | 0.675 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.