Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7977 | 24154;24155;24156 | chr2:178719563;178719562;178719561 | chr2:179584290;179584289;179584288 |
N2AB | 7660 | 23203;23204;23205 | chr2:178719563;178719562;178719561 | chr2:179584290;179584289;179584288 |
N2A | 6733 | 20422;20423;20424 | chr2:178719563;178719562;178719561 | chr2:179584290;179584289;179584288 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/Q | rs1340162231 | None | 0.68 | N | 0.354 | 0.266 | 0.139678290688 | gnomAD-4.0.0 | 1.37764E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.81001E-06 | 0 | 0 |
H/R | rs1357770681 | None | 0.68 | N | 0.342 | 0.242 | 0.315314060047 | gnomAD-4.0.0 | 2.06622E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.71478E-06 | 0 | 0 |
H/Y | None | None | 0.006 | N | 0.079 | 0.259 | 0.286081765059 | gnomAD-4.0.0 | 1.61498E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.91189E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.1859 | likely_benign | 0.187 | benign | -0.306 | Destabilizing | 0.098 | N | 0.312 | neutral | None | None | None | None | N |
H/C | 0.195 | likely_benign | 0.2006 | benign | 0.325 | Stabilizing | 0.968 | D | 0.509 | neutral | None | None | None | None | N |
H/D | 0.0996 | likely_benign | 0.0903 | benign | 0.097 | Stabilizing | None | N | 0.141 | neutral | N | 0.422966345 | None | None | N |
H/E | 0.1625 | likely_benign | 0.1552 | benign | 0.139 | Stabilizing | 0.111 | N | 0.215 | neutral | None | None | None | None | N |
H/F | 0.2515 | likely_benign | 0.254 | benign | 0.396 | Stabilizing | 0.223 | N | 0.448 | neutral | None | None | None | None | N |
H/G | 0.272 | likely_benign | 0.2608 | benign | -0.612 | Destabilizing | 0.365 | N | 0.351 | neutral | None | None | None | None | N |
H/I | 0.2191 | likely_benign | 0.2174 | benign | 0.493 | Stabilizing | 0.008 | N | 0.297 | neutral | None | None | None | None | N |
H/K | 0.2009 | likely_benign | 0.1955 | benign | -0.236 | Destabilizing | 0.365 | N | 0.39 | neutral | None | None | None | None | N |
H/L | 0.1041 | likely_benign | 0.0994 | benign | 0.493 | Stabilizing | 0.039 | N | 0.33 | neutral | N | 0.483745445 | None | None | N |
H/M | 0.359 | ambiguous | 0.3569 | ambiguous | 0.374 | Stabilizing | 0.908 | D | 0.555 | neutral | None | None | None | None | N |
H/N | 0.0664 | likely_benign | 0.0657 | benign | -0.093 | Destabilizing | 0.178 | N | 0.311 | neutral | N | 0.4385118 | None | None | N |
H/P | 0.5489 | ambiguous | 0.4733 | ambiguous | 0.251 | Stabilizing | 0.68 | D | 0.515 | neutral | N | 0.482325422 | None | None | N |
H/Q | 0.1238 | likely_benign | 0.1183 | benign | 0.02 | Stabilizing | 0.68 | D | 0.354 | neutral | N | 0.407764819 | None | None | N |
H/R | 0.0966 | likely_benign | 0.0933 | benign | -0.662 | Destabilizing | 0.68 | D | 0.342 | neutral | N | 0.470104144 | None | None | N |
H/S | 0.1412 | likely_benign | 0.1383 | benign | -0.183 | Destabilizing | 0.111 | N | 0.288 | neutral | None | None | None | None | N |
H/T | 0.1584 | likely_benign | 0.1605 | benign | -0.044 | Destabilizing | 0.003 | N | 0.185 | neutral | None | None | None | None | N |
H/V | 0.1681 | likely_benign | 0.167 | benign | 0.251 | Stabilizing | 0.003 | N | 0.277 | neutral | None | None | None | None | N |
H/W | 0.3839 | ambiguous | 0.3691 | ambiguous | 0.539 | Stabilizing | 0.968 | D | 0.504 | neutral | None | None | None | None | N |
H/Y | 0.0895 | likely_benign | 0.0893 | benign | 0.801 | Stabilizing | 0.006 | N | 0.079 | neutral | N | 0.48426552 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.