Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7991 | 24196;24197;24198 | chr2:178719419;178719418;178719417 | chr2:179584146;179584145;179584144 |
N2AB | 7674 | 23245;23246;23247 | chr2:178719419;178719418;178719417 | chr2:179584146;179584145;179584144 |
N2A | 6747 | 20464;20465;20466 | chr2:178719419;178719418;178719417 | chr2:179584146;179584145;179584144 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | rs780984243 | -2.023 | 0.999 | N | 0.888 | 0.428 | 0.745525825506 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.7262 | likely_pathogenic | 0.8345 | pathogenic | -2.182 | Highly Destabilizing | 0.991 | D | 0.638 | neutral | None | None | None | None | N |
L/C | 0.8672 | likely_pathogenic | 0.9305 | pathogenic | -1.441 | Destabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | N |
L/D | 0.9912 | likely_pathogenic | 0.9969 | pathogenic | -1.781 | Destabilizing | 0.999 | D | 0.889 | deleterious | None | None | None | None | N |
L/E | 0.9408 | likely_pathogenic | 0.9767 | pathogenic | -1.689 | Destabilizing | 0.999 | D | 0.871 | deleterious | None | None | None | None | N |
L/F | 0.5692 | likely_pathogenic | 0.7038 | pathogenic | -1.424 | Destabilizing | 0.289 | N | 0.372 | neutral | None | None | None | None | N |
L/G | 0.9212 | likely_pathogenic | 0.9645 | pathogenic | -2.618 | Highly Destabilizing | 0.998 | D | 0.859 | deleterious | None | None | None | None | N |
L/H | 0.9234 | likely_pathogenic | 0.9728 | pathogenic | -1.879 | Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
L/I | 0.2113 | likely_benign | 0.268 | benign | -0.992 | Destabilizing | 0.966 | D | 0.531 | neutral | None | None | None | None | N |
L/K | 0.932 | likely_pathogenic | 0.9712 | pathogenic | -1.499 | Destabilizing | 0.999 | D | 0.827 | deleterious | None | None | None | None | N |
L/M | 0.1993 | likely_benign | 0.2633 | benign | -0.81 | Destabilizing | 0.997 | D | 0.767 | deleterious | N | 0.47319462 | None | None | N |
L/N | 0.9437 | likely_pathogenic | 0.9769 | pathogenic | -1.446 | Destabilizing | 0.999 | D | 0.888 | deleterious | None | None | None | None | N |
L/P | 0.2935 | likely_benign | 0.5215 | ambiguous | -1.362 | Destabilizing | 0.999 | D | 0.888 | deleterious | N | 0.462057011 | None | None | N |
L/Q | 0.7759 | likely_pathogenic | 0.9082 | pathogenic | -1.52 | Destabilizing | 1.0 | D | 0.865 | deleterious | N | 0.490894028 | None | None | N |
L/R | 0.8865 | likely_pathogenic | 0.9512 | pathogenic | -1.015 | Destabilizing | 0.999 | D | 0.858 | deleterious | D | 0.526937954 | None | None | N |
L/S | 0.9263 | likely_pathogenic | 0.9725 | pathogenic | -2.174 | Highly Destabilizing | 0.998 | D | 0.822 | deleterious | None | None | None | None | N |
L/T | 0.7996 | likely_pathogenic | 0.8996 | pathogenic | -1.949 | Destabilizing | 0.998 | D | 0.772 | deleterious | None | None | None | None | N |
L/V | 0.2378 | likely_benign | 0.3293 | benign | -1.362 | Destabilizing | 0.977 | D | 0.501 | neutral | N | 0.483790457 | None | None | N |
L/W | 0.8711 | likely_pathogenic | 0.9443 | pathogenic | -1.599 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
L/Y | 0.9346 | likely_pathogenic | 0.9709 | pathogenic | -1.362 | Destabilizing | 0.99 | D | 0.807 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.