Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7992 | 24199;24200;24201 | chr2:178719416;178719415;178719414 | chr2:179584143;179584142;179584141 |
N2AB | 7675 | 23248;23249;23250 | chr2:178719416;178719415;178719414 | chr2:179584143;179584142;179584141 |
N2A | 6748 | 20467;20468;20469 | chr2:178719416;178719415;178719414 | chr2:179584143;179584142;179584141 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/I | None | None | 0.852 | N | 0.426 | 0.443 | 0.728599915167 | gnomAD-4.0.0 | 1.5926E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43316E-05 | 0 |
K/Q | rs1420514205 | 0.223 | 0.92 | N | 0.391 | 0.316 | 0.32082282376 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
K/Q | rs1420514205 | 0.223 | 0.92 | N | 0.391 | 0.316 | 0.32082282376 | gnomAD-4.0.0 | 1.59264E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.4332E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3884 | ambiguous | 0.4081 | ambiguous | 0.058 | Stabilizing | 0.863 | D | 0.361 | neutral | None | None | None | None | I |
K/C | 0.7477 | likely_pathogenic | 0.7728 | pathogenic | -0.346 | Destabilizing | 0.999 | D | 0.371 | neutral | None | None | None | None | I |
K/D | 0.5763 | likely_pathogenic | 0.6 | pathogenic | -0.249 | Destabilizing | 0.969 | D | 0.407 | neutral | None | None | None | None | I |
K/E | 0.1714 | likely_benign | 0.1685 | benign | -0.256 | Destabilizing | 0.92 | D | 0.377 | neutral | N | 0.496312097 | None | None | I |
K/F | 0.8176 | likely_pathogenic | 0.8533 | pathogenic | -0.225 | Destabilizing | 0.982 | D | 0.42 | neutral | None | None | None | None | I |
K/G | 0.4268 | ambiguous | 0.4471 | ambiguous | -0.095 | Destabilizing | 0.969 | D | 0.392 | neutral | None | None | None | None | I |
K/H | 0.2986 | likely_benign | 0.335 | benign | -0.234 | Destabilizing | 0.997 | D | 0.394 | neutral | None | None | None | None | I |
K/I | 0.5059 | ambiguous | 0.5351 | ambiguous | 0.379 | Stabilizing | 0.852 | D | 0.426 | neutral | N | 0.500486264 | None | None | I |
K/L | 0.4556 | ambiguous | 0.4882 | ambiguous | 0.379 | Stabilizing | 0.759 | D | 0.336 | neutral | None | None | None | None | I |
K/M | 0.3334 | likely_benign | 0.3563 | ambiguous | 0.006 | Stabilizing | 0.579 | D | 0.245 | neutral | None | None | None | None | I |
K/N | 0.4456 | ambiguous | 0.4646 | ambiguous | 0.093 | Stabilizing | 0.959 | D | 0.363 | neutral | N | 0.492977846 | None | None | I |
K/P | 0.6586 | likely_pathogenic | 0.7203 | pathogenic | 0.297 | Stabilizing | 0.997 | D | 0.415 | neutral | None | None | None | None | I |
K/Q | 0.133 | likely_benign | 0.1381 | benign | -0.058 | Destabilizing | 0.92 | D | 0.391 | neutral | N | 0.476110183 | None | None | I |
K/R | 0.0783 | likely_benign | 0.0796 | benign | -0.069 | Destabilizing | 0.035 | N | 0.168 | neutral | N | 0.464989112 | None | None | I |
K/S | 0.4225 | ambiguous | 0.4499 | ambiguous | -0.277 | Destabilizing | 0.884 | D | 0.354 | neutral | None | None | None | None | I |
K/T | 0.2279 | likely_benign | 0.2272 | benign | -0.159 | Destabilizing | 0.134 | N | 0.137 | neutral | N | 0.497178889 | None | None | I |
K/V | 0.4559 | ambiguous | 0.4752 | ambiguous | 0.297 | Stabilizing | 0.17 | N | 0.201 | neutral | None | None | None | None | I |
K/W | 0.7075 | likely_pathogenic | 0.7683 | pathogenic | -0.314 | Destabilizing | 0.999 | D | 0.396 | neutral | None | None | None | None | I |
K/Y | 0.6704 | likely_pathogenic | 0.7141 | pathogenic | 0.039 | Stabilizing | 0.997 | D | 0.408 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.