Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7993 | 24202;24203;24204 | chr2:178719413;178719412;178719411 | chr2:179584140;179584139;179584138 |
N2AB | 7676 | 23251;23252;23253 | chr2:178719413;178719412;178719411 | chr2:179584140;179584139;179584138 |
N2A | 6749 | 20470;20471;20472 | chr2:178719413;178719412;178719411 | chr2:179584140;179584139;179584138 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | rs751011918 | -0.1 | 0.004 | N | 0.069 | 0.123 | 0.0954503805726 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
D/E | rs751011918 | -0.1 | 0.004 | N | 0.069 | 0.123 | 0.0954503805726 | gnomAD-4.0.0 | 1.36886E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.31911E-05 | 0 |
D/G | None | None | 0.379 | N | 0.301 | 0.235 | 0.168933306366 | gnomAD-4.0.0 | 1.59251E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86189E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.136 | likely_benign | 0.1576 | benign | -0.176 | Destabilizing | 0.379 | N | 0.339 | neutral | N | 0.47207853 | None | None | N |
D/C | 0.639 | likely_pathogenic | 0.6996 | pathogenic | 0.027 | Stabilizing | 0.992 | D | 0.474 | neutral | None | None | None | None | N |
D/E | 0.1356 | likely_benign | 0.1532 | benign | -0.346 | Destabilizing | 0.004 | N | 0.069 | neutral | N | 0.452805596 | None | None | N |
D/F | 0.5903 | likely_pathogenic | 0.659 | pathogenic | -0.179 | Destabilizing | 0.92 | D | 0.45 | neutral | None | None | None | None | N |
D/G | 0.1303 | likely_benign | 0.1503 | benign | -0.363 | Destabilizing | 0.379 | N | 0.301 | neutral | N | 0.474115992 | None | None | N |
D/H | 0.256 | likely_benign | 0.2881 | benign | 0.023 | Stabilizing | 0.81 | D | 0.403 | neutral | N | 0.478928612 | None | None | N |
D/I | 0.3636 | ambiguous | 0.4324 | ambiguous | 0.262 | Stabilizing | 0.739 | D | 0.451 | neutral | None | None | None | None | N |
D/K | 0.3058 | likely_benign | 0.3415 | ambiguous | 0.311 | Stabilizing | 0.447 | N | 0.287 | neutral | None | None | None | None | N |
D/L | 0.3824 | ambiguous | 0.446 | ambiguous | 0.262 | Stabilizing | 0.739 | D | 0.405 | neutral | None | None | None | None | N |
D/M | 0.5442 | ambiguous | 0.6175 | pathogenic | 0.306 | Stabilizing | 0.977 | D | 0.433 | neutral | None | None | None | None | N |
D/N | 0.0854 | likely_benign | 0.0926 | benign | 0.051 | Stabilizing | 0.004 | N | 0.225 | neutral | N | 0.488051533 | None | None | N |
D/P | 0.3711 | ambiguous | 0.3943 | ambiguous | 0.138 | Stabilizing | 0.92 | D | 0.387 | neutral | None | None | None | None | N |
D/Q | 0.3034 | likely_benign | 0.3466 | ambiguous | 0.077 | Stabilizing | 0.739 | D | 0.327 | neutral | None | None | None | None | N |
D/R | 0.3457 | ambiguous | 0.3818 | ambiguous | 0.483 | Stabilizing | 0.85 | D | 0.397 | neutral | None | None | None | None | N |
D/S | 0.1221 | likely_benign | 0.1365 | benign | -0.046 | Destabilizing | 0.25 | N | 0.273 | neutral | None | None | None | None | N |
D/T | 0.2019 | likely_benign | 0.2297 | benign | 0.095 | Stabilizing | 0.005 | N | 0.219 | neutral | None | None | None | None | N |
D/V | 0.204 | likely_benign | 0.2434 | benign | 0.138 | Stabilizing | 0.379 | N | 0.41 | neutral | N | 0.476522302 | None | None | N |
D/W | 0.8505 | likely_pathogenic | 0.884 | pathogenic | -0.088 | Destabilizing | 0.992 | D | 0.578 | neutral | None | None | None | None | N |
D/Y | 0.2081 | likely_benign | 0.2432 | benign | 0.049 | Stabilizing | 0.896 | D | 0.45 | neutral | N | 0.492259927 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.