Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7998 | 24217;24218;24219 | chr2:178719398;178719397;178719396 | chr2:179584125;179584124;179584123 |
N2AB | 7681 | 23266;23267;23268 | chr2:178719398;178719397;178719396 | chr2:179584125;179584124;179584123 |
N2A | 6754 | 20485;20486;20487 | chr2:178719398;178719397;178719396 | chr2:179584125;179584124;179584123 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/Q | rs1188351264 | -0.888 | 0.497 | N | 0.561 | 0.282 | 0.611542178662 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.57E-05 | None | 0 | None | 0 | 0 | 0 |
L/Q | rs1188351264 | -0.888 | 0.497 | N | 0.561 | 0.282 | 0.611542178662 | gnomAD-4.0.0 | 1.3685E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.5194E-05 | None | 0 | 0 | 8.99541E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.1047 | likely_benign | 0.1099 | benign | -1.079 | Destabilizing | 0.157 | N | 0.391 | neutral | None | None | None | None | I |
L/C | 0.3483 | ambiguous | 0.3508 | ambiguous | -0.786 | Destabilizing | 0.909 | D | 0.447 | neutral | None | None | None | None | I |
L/D | 0.4372 | ambiguous | 0.4582 | ambiguous | -0.462 | Destabilizing | 0.726 | D | 0.631 | neutral | None | None | None | None | I |
L/E | 0.1872 | likely_benign | 0.1991 | benign | -0.503 | Destabilizing | 0.726 | D | 0.621 | neutral | None | None | None | None | I |
L/F | 0.0958 | likely_benign | 0.1036 | benign | -0.77 | Destabilizing | 0.567 | D | 0.337 | neutral | None | None | None | None | I |
L/G | 0.2873 | likely_benign | 0.3038 | benign | -1.33 | Destabilizing | 0.567 | D | 0.617 | neutral | None | None | None | None | I |
L/H | 0.1195 | likely_benign | 0.1319 | benign | -0.501 | Destabilizing | 0.968 | D | 0.667 | neutral | None | None | None | None | I |
L/I | 0.0771 | likely_benign | 0.0771 | benign | -0.502 | Destabilizing | 0.005 | N | 0.308 | neutral | None | None | None | None | I |
L/K | 0.1393 | likely_benign | 0.1399 | benign | -0.741 | Destabilizing | 0.567 | D | 0.541 | neutral | None | None | None | None | I |
L/M | 0.1064 | likely_benign | 0.1095 | benign | -0.503 | Destabilizing | 0.02 | N | 0.397 | neutral | N | 0.480413485 | None | None | I |
L/N | 0.2573 | likely_benign | 0.2661 | benign | -0.562 | Destabilizing | 0.726 | D | 0.629 | neutral | None | None | None | None | I |
L/P | 0.1686 | likely_benign | 0.2079 | benign | -0.661 | Destabilizing | 0.859 | D | 0.632 | neutral | N | 0.471369927 | None | None | I |
L/Q | 0.0864 | likely_benign | 0.0886 | benign | -0.744 | Destabilizing | 0.497 | N | 0.561 | neutral | N | 0.469657774 | None | None | I |
L/R | 0.0951 | likely_benign | 0.0983 | benign | -0.156 | Destabilizing | 0.497 | N | 0.56 | neutral | N | 0.495785582 | None | None | I |
L/S | 0.1092 | likely_benign | 0.1144 | benign | -1.1 | Destabilizing | 0.567 | D | 0.509 | neutral | None | None | None | None | I |
L/T | 0.1053 | likely_benign | 0.1108 | benign | -1.024 | Destabilizing | 0.157 | N | 0.393 | neutral | None | None | None | None | I |
L/V | 0.0745 | likely_benign | 0.0755 | benign | -0.661 | Destabilizing | 0.001 | N | 0.167 | neutral | N | 0.394503867 | None | None | I |
L/W | 0.1509 | likely_benign | 0.1617 | benign | -0.802 | Destabilizing | 0.968 | D | 0.671 | neutral | None | None | None | None | I |
L/Y | 0.2212 | likely_benign | 0.2376 | benign | -0.578 | Destabilizing | 0.726 | D | 0.392 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.