Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC799824217;24218;24219 chr2:178719398;178719397;178719396chr2:179584125;179584124;179584123
N2AB768123266;23267;23268 chr2:178719398;178719397;178719396chr2:179584125;179584124;179584123
N2A675420485;20486;20487 chr2:178719398;178719397;178719396chr2:179584125;179584124;179584123
N2BNoneNone chr2:Nonechr2:None
Novex-1NoneNone chr2:Nonechr2:None
Novex-2NoneNone chr2:Nonechr2:None
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTG
  • RefSeq wild type template codon: GAC
  • Domain: Ig-65
  • Domain position: 14
  • Structural Position: 23
  • Q(SASA): 0.4043
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/Q rs1188351264 -0.888 0.497 N 0.561 0.282 0.611542178662 gnomAD-2.1.1 4.02E-06 None None None None I None 0 0 None 0 5.57E-05 None 0 None 0 0 0
L/Q rs1188351264 -0.888 0.497 N 0.561 0.282 0.611542178662 gnomAD-4.0.0 1.3685E-06 None None None None I None 0 0 None 0 2.5194E-05 None 0 0 8.99541E-07 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.1047 likely_benign 0.1099 benign -1.079 Destabilizing 0.157 N 0.391 neutral None None None None I
L/C 0.3483 ambiguous 0.3508 ambiguous -0.786 Destabilizing 0.909 D 0.447 neutral None None None None I
L/D 0.4372 ambiguous 0.4582 ambiguous -0.462 Destabilizing 0.726 D 0.631 neutral None None None None I
L/E 0.1872 likely_benign 0.1991 benign -0.503 Destabilizing 0.726 D 0.621 neutral None None None None I
L/F 0.0958 likely_benign 0.1036 benign -0.77 Destabilizing 0.567 D 0.337 neutral None None None None I
L/G 0.2873 likely_benign 0.3038 benign -1.33 Destabilizing 0.567 D 0.617 neutral None None None None I
L/H 0.1195 likely_benign 0.1319 benign -0.501 Destabilizing 0.968 D 0.667 neutral None None None None I
L/I 0.0771 likely_benign 0.0771 benign -0.502 Destabilizing 0.005 N 0.308 neutral None None None None I
L/K 0.1393 likely_benign 0.1399 benign -0.741 Destabilizing 0.567 D 0.541 neutral None None None None I
L/M 0.1064 likely_benign 0.1095 benign -0.503 Destabilizing 0.02 N 0.397 neutral N 0.480413485 None None I
L/N 0.2573 likely_benign 0.2661 benign -0.562 Destabilizing 0.726 D 0.629 neutral None None None None I
L/P 0.1686 likely_benign 0.2079 benign -0.661 Destabilizing 0.859 D 0.632 neutral N 0.471369927 None None I
L/Q 0.0864 likely_benign 0.0886 benign -0.744 Destabilizing 0.497 N 0.561 neutral N 0.469657774 None None I
L/R 0.0951 likely_benign 0.0983 benign -0.156 Destabilizing 0.497 N 0.56 neutral N 0.495785582 None None I
L/S 0.1092 likely_benign 0.1144 benign -1.1 Destabilizing 0.567 D 0.509 neutral None None None None I
L/T 0.1053 likely_benign 0.1108 benign -1.024 Destabilizing 0.157 N 0.393 neutral None None None None I
L/V 0.0745 likely_benign 0.0755 benign -0.661 Destabilizing 0.001 N 0.167 neutral N 0.394503867 None None I
L/W 0.1509 likely_benign 0.1617 benign -0.802 Destabilizing 0.968 D 0.671 neutral None None None None I
L/Y 0.2212 likely_benign 0.2376 benign -0.578 Destabilizing 0.726 D 0.392 neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.