Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7999 | 24220;24221;24222 | chr2:178719395;178719394;178719393 | chr2:179584122;179584121;179584120 |
N2AB | 7682 | 23269;23270;23271 | chr2:178719395;178719394;178719393 | chr2:179584122;179584121;179584120 |
N2A | 6755 | 20488;20489;20490 | chr2:178719395;178719394;178719393 | chr2:179584122;179584121;179584120 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | rs750389762 | -0.27 | 1.0 | D | 0.791 | 0.571 | 0.661045744637 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
G/A | rs750389762 | -0.27 | 1.0 | D | 0.791 | 0.571 | 0.661045744637 | gnomAD-4.0.0 | 1.59148E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 2.41546E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.1913 | likely_benign | 0.2219 | benign | -0.24 | Destabilizing | 1.0 | D | 0.791 | deleterious | D | 0.604556301 | None | None | I |
G/C | 0.3764 | ambiguous | 0.4133 | ambiguous | -0.883 | Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | I |
G/D | 0.1469 | likely_benign | 0.1629 | benign | -0.138 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | I |
G/E | 0.1945 | likely_benign | 0.2309 | benign | -0.266 | Destabilizing | 1.0 | D | 0.86 | deleterious | D | 0.596410896 | None | None | I |
G/F | 0.6237 | likely_pathogenic | 0.6687 | pathogenic | -0.752 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | I |
G/H | 0.2957 | likely_benign | 0.3443 | ambiguous | -0.47 | Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | I |
G/I | 0.5804 | likely_pathogenic | 0.6591 | pathogenic | -0.243 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | I |
G/K | 0.3444 | ambiguous | 0.3913 | ambiguous | -0.766 | Destabilizing | 1.0 | D | 0.856 | deleterious | None | None | None | None | I |
G/L | 0.5005 | ambiguous | 0.5698 | pathogenic | -0.243 | Destabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | I |
G/M | 0.6008 | likely_pathogenic | 0.655 | pathogenic | -0.435 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | I |
G/N | 0.2134 | likely_benign | 0.2268 | benign | -0.5 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | I |
G/P | 0.8216 | likely_pathogenic | 0.8796 | pathogenic | -0.206 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | I |
G/Q | 0.2874 | likely_benign | 0.3364 | benign | -0.688 | Destabilizing | 1.0 | D | 0.878 | deleterious | None | None | None | None | I |
G/R | 0.2535 | likely_benign | 0.2909 | benign | -0.423 | Destabilizing | 1.0 | D | 0.883 | deleterious | D | 0.625188595 | None | None | I |
G/S | 0.127 | likely_benign | 0.1434 | benign | -0.735 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | I |
G/T | 0.2648 | likely_benign | 0.3083 | benign | -0.773 | Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | I |
G/V | 0.4212 | ambiguous | 0.4931 | ambiguous | -0.206 | Destabilizing | 1.0 | D | 0.845 | deleterious | D | 0.646517382 | None | None | I |
G/W | 0.4824 | ambiguous | 0.5326 | ambiguous | -0.962 | Destabilizing | 1.0 | D | 0.863 | deleterious | D | 0.646719186 | None | None | I |
G/Y | 0.4321 | ambiguous | 0.4695 | ambiguous | -0.587 | Destabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.