Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8000 | 24223;24224;24225 | chr2:178719392;178719391;178719390 | chr2:179584119;179584118;179584117 |
N2AB | 7683 | 23272;23273;23274 | chr2:178719392;178719391;178719390 | chr2:179584119;179584118;179584117 |
N2A | 6756 | 20491;20492;20493 | chr2:178719392;178719391;178719390 | chr2:179584119;179584118;179584117 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/P | None | None | 0.106 | N | 0.464 | 0.032 | 0.112648838833 | gnomAD-4.0.0 | 6.84253E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99531E-07 | 0 | 0 |
A/S | rs2077990712 | None | None | N | 0.099 | 0.049 | 0.0401082797425 | gnomAD-4.0.0 | 6.84253E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99531E-07 | 0 | 0 |
A/T | None | None | None | N | 0.15 | 0.025 | 0.0611884634855 | gnomAD-4.0.0 | 4.78977E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.39719E-06 | 0 | 1.65656E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.3078 | likely_benign | 0.3052 | benign | -0.806 | Destabilizing | 0.676 | D | 0.4 | neutral | None | None | None | None | I |
A/D | 0.1243 | likely_benign | 0.1251 | benign | 0.05 | Stabilizing | 0.012 | N | 0.404 | neutral | N | 0.364738321 | None | None | I |
A/E | 0.136 | likely_benign | 0.1383 | benign | -0.051 | Destabilizing | 0.001 | N | 0.175 | neutral | None | None | None | None | I |
A/F | 0.2035 | likely_benign | 0.2077 | benign | -0.724 | Destabilizing | 0.356 | N | 0.445 | neutral | None | None | None | None | I |
A/G | 0.0813 | likely_benign | 0.0846 | benign | -0.532 | Destabilizing | None | N | 0.145 | neutral | N | 0.409761321 | None | None | I |
A/H | 0.2487 | likely_benign | 0.2652 | benign | -0.553 | Destabilizing | 0.356 | N | 0.439 | neutral | None | None | None | None | I |
A/I | 0.1704 | likely_benign | 0.1985 | benign | -0.205 | Destabilizing | 0.038 | N | 0.481 | neutral | None | None | None | None | I |
A/K | 0.1988 | likely_benign | 0.2103 | benign | -0.62 | Destabilizing | None | N | 0.145 | neutral | None | None | None | None | I |
A/L | 0.1272 | likely_benign | 0.1406 | benign | -0.205 | Destabilizing | 0.016 | N | 0.43 | neutral | None | None | None | None | I |
A/M | 0.147 | likely_benign | 0.1623 | benign | -0.328 | Destabilizing | 0.356 | N | 0.423 | neutral | None | None | None | None | I |
A/N | 0.1135 | likely_benign | 0.113 | benign | -0.342 | Destabilizing | 0.038 | N | 0.393 | neutral | None | None | None | None | I |
A/P | 0.2678 | likely_benign | 0.3345 | benign | -0.229 | Destabilizing | 0.106 | N | 0.464 | neutral | N | 0.467521546 | None | None | I |
A/Q | 0.1902 | likely_benign | 0.1933 | benign | -0.515 | Destabilizing | 0.072 | N | 0.463 | neutral | None | None | None | None | I |
A/R | 0.1964 | likely_benign | 0.2034 | benign | -0.308 | Destabilizing | 0.038 | N | 0.447 | neutral | None | None | None | None | I |
A/S | 0.0637 | likely_benign | 0.0597 | benign | -0.711 | Destabilizing | None | N | 0.099 | neutral | N | 0.342536252 | None | None | I |
A/T | 0.0607 | likely_benign | 0.0613 | benign | -0.708 | Destabilizing | None | N | 0.15 | neutral | N | 0.405510295 | None | None | I |
A/V | 0.0991 | likely_benign | 0.1098 | benign | -0.229 | Destabilizing | 0.029 | N | 0.314 | neutral | N | 0.463654521 | None | None | I |
A/W | 0.5033 | ambiguous | 0.5369 | ambiguous | -0.918 | Destabilizing | 0.864 | D | 0.463 | neutral | None | None | None | None | I |
A/Y | 0.2469 | likely_benign | 0.2635 | benign | -0.537 | Destabilizing | 0.356 | N | 0.446 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.