Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8002 | 24229;24230;24231 | chr2:178719386;178719385;178719384 | chr2:179584113;179584112;179584111 |
N2AB | 7685 | 23278;23279;23280 | chr2:178719386;178719385;178719384 | chr2:179584113;179584112;179584111 |
N2A | 6758 | 20497;20498;20499 | chr2:178719386;178719385;178719384 | chr2:179584113;179584112;179584111 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | None | N | 0.132 | 0.074 | 0.149567049428 | gnomAD-4.0.0 | 2.05267E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.51915E-05 | None | 0 | 0 | 1.799E-06 | 0 | 0 |
V/F | rs1332361126 | -1.004 | 0.317 | N | 0.723 | 0.184 | 0.3691244813 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
V/F | rs1332361126 | -1.004 | 0.317 | N | 0.723 | 0.184 | 0.3691244813 | gnomAD-4.0.0 | 3.18264E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.7171E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.0782 | likely_benign | 0.08 | benign | -1.508 | Destabilizing | None | N | 0.132 | neutral | N | 0.446186268 | None | None | I |
V/C | 0.5465 | ambiguous | 0.56 | ambiguous | -1.379 | Destabilizing | 0.824 | D | 0.689 | prob.neutral | None | None | None | None | I |
V/D | 0.4151 | ambiguous | 0.4623 | ambiguous | -0.843 | Destabilizing | 0.317 | N | 0.731 | prob.delet. | D | 0.522053336 | None | None | I |
V/E | 0.3696 | ambiguous | 0.411 | ambiguous | -0.771 | Destabilizing | 0.149 | N | 0.68 | prob.neutral | None | None | None | None | I |
V/F | 0.1668 | likely_benign | 0.1954 | benign | -0.977 | Destabilizing | 0.317 | N | 0.723 | prob.delet. | N | 0.509373742 | None | None | I |
V/G | 0.177 | likely_benign | 0.1848 | benign | -1.894 | Destabilizing | None | N | 0.417 | neutral | N | 0.469208602 | None | None | I |
V/H | 0.5178 | ambiguous | 0.5606 | ambiguous | -1.251 | Destabilizing | 0.935 | D | 0.727 | prob.delet. | None | None | None | None | I |
V/I | 0.0727 | likely_benign | 0.0819 | benign | -0.526 | Destabilizing | None | N | 0.271 | neutral | N | 0.478010685 | None | None | I |
V/K | 0.4022 | ambiguous | 0.4222 | ambiguous | -1.256 | Destabilizing | 0.149 | N | 0.684 | prob.neutral | None | None | None | None | I |
V/L | 0.1393 | likely_benign | 0.1715 | benign | -0.526 | Destabilizing | 0.009 | N | 0.461 | neutral | N | 0.469889847 | None | None | I |
V/M | 0.1078 | likely_benign | 0.1214 | benign | -0.635 | Destabilizing | 0.38 | N | 0.611 | neutral | None | None | None | None | I |
V/N | 0.2676 | likely_benign | 0.3149 | benign | -1.233 | Destabilizing | 0.38 | N | 0.737 | prob.delet. | None | None | None | None | I |
V/P | 0.6128 | likely_pathogenic | 0.6873 | pathogenic | -0.819 | Destabilizing | 0.38 | N | 0.721 | prob.delet. | None | None | None | None | I |
V/Q | 0.3681 | ambiguous | 0.3908 | ambiguous | -1.232 | Destabilizing | 0.555 | D | 0.723 | prob.delet. | None | None | None | None | I |
V/R | 0.324 | likely_benign | 0.3456 | ambiguous | -0.891 | Destabilizing | 0.38 | N | 0.74 | deleterious | None | None | None | None | I |
V/S | 0.148 | likely_benign | 0.1622 | benign | -1.911 | Destabilizing | 0.081 | N | 0.589 | neutral | None | None | None | None | I |
V/T | 0.1028 | likely_benign | 0.1106 | benign | -1.689 | Destabilizing | 0.002 | N | 0.26 | neutral | None | None | None | None | I |
V/W | 0.7404 | likely_pathogenic | 0.7938 | pathogenic | -1.141 | Destabilizing | 0.935 | D | 0.727 | prob.delet. | None | None | None | None | I |
V/Y | 0.4819 | ambiguous | 0.5322 | ambiguous | -0.848 | Destabilizing | 0.555 | D | 0.727 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.