Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8004 | 24235;24236;24237 | chr2:178719380;178719379;178719378 | chr2:179584107;179584106;179584105 |
N2AB | 7687 | 23284;23285;23286 | chr2:178719380;178719379;178719378 | chr2:179584107;179584106;179584105 |
N2A | 6760 | 20503;20504;20505 | chr2:178719380;178719379;178719378 | chr2:179584107;179584106;179584105 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/W | rs1274821392 | -1.743 | 1.0 | D | 0.836 | 0.753 | 0.882730752339 | gnomAD-2.1.1 | 2.01E-05 | None | None | None | None | N | None | 0 | 1.44928E-04 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
L/W | rs1274821392 | -1.743 | 1.0 | D | 0.836 | 0.753 | 0.882730752339 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 1.30959E-04 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
L/W | rs1274821392 | -1.743 | 1.0 | D | 0.836 | 0.753 | 0.882730752339 | gnomAD-4.0.0 | 8.96797E-06 | None | None | None | None | N | None | 0 | 1.01685E-04 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 2.84446E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.6834 | likely_pathogenic | 0.7719 | pathogenic | -2.224 | Highly Destabilizing | 0.97 | D | 0.704 | prob.neutral | None | None | None | None | N |
L/C | 0.8289 | likely_pathogenic | 0.8804 | pathogenic | -1.504 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | N |
L/D | 0.9894 | likely_pathogenic | 0.9938 | pathogenic | -3.075 | Highly Destabilizing | 0.999 | D | 0.879 | deleterious | None | None | None | None | N |
L/E | 0.9271 | likely_pathogenic | 0.9536 | pathogenic | -2.778 | Highly Destabilizing | 0.999 | D | 0.877 | deleterious | None | None | None | None | N |
L/F | 0.1105 | likely_benign | 0.1346 | benign | -1.428 | Destabilizing | 0.989 | D | 0.696 | prob.neutral | N | 0.496176024 | None | None | N |
L/G | 0.9145 | likely_pathogenic | 0.9467 | pathogenic | -2.772 | Highly Destabilizing | 0.996 | D | 0.876 | deleterious | None | None | None | None | N |
L/H | 0.7864 | likely_pathogenic | 0.8567 | pathogenic | -2.527 | Highly Destabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | N |
L/I | 0.1598 | likely_benign | 0.19 | benign | -0.587 | Destabilizing | 0.304 | N | 0.265 | neutral | None | None | None | None | N |
L/K | 0.8806 | likely_pathogenic | 0.9136 | pathogenic | -1.816 | Destabilizing | 0.996 | D | 0.84 | deleterious | None | None | None | None | N |
L/M | 0.092 | likely_benign | 0.1013 | benign | -0.675 | Destabilizing | 0.835 | D | 0.387 | neutral | D | 0.559127204 | None | None | N |
L/N | 0.9512 | likely_pathogenic | 0.9715 | pathogenic | -2.497 | Highly Destabilizing | 0.999 | D | 0.875 | deleterious | None | None | None | None | N |
L/P | 0.9639 | likely_pathogenic | 0.9753 | pathogenic | -1.122 | Destabilizing | 0.999 | D | 0.877 | deleterious | None | None | None | None | N |
L/Q | 0.6924 | likely_pathogenic | 0.7708 | pathogenic | -2.164 | Highly Destabilizing | 0.996 | D | 0.854 | deleterious | None | None | None | None | N |
L/R | 0.8027 | likely_pathogenic | 0.8599 | pathogenic | -1.956 | Destabilizing | 0.996 | D | 0.853 | deleterious | None | None | None | None | N |
L/S | 0.8494 | likely_pathogenic | 0.9101 | pathogenic | -2.995 | Highly Destabilizing | 0.994 | D | 0.815 | deleterious | D | 0.638668452 | None | None | N |
L/T | 0.7296 | likely_pathogenic | 0.8148 | pathogenic | -2.536 | Highly Destabilizing | 0.996 | D | 0.752 | deleterious | None | None | None | None | N |
L/V | 0.1827 | likely_benign | 0.2238 | benign | -1.122 | Destabilizing | 0.835 | D | 0.537 | neutral | D | 0.57474281 | None | None | N |
L/W | 0.4278 | ambiguous | 0.5213 | ambiguous | -1.817 | Destabilizing | 1.0 | D | 0.836 | deleterious | D | 0.582948936 | None | None | N |
L/Y | 0.6226 | likely_pathogenic | 0.7169 | pathogenic | -1.516 | Destabilizing | 0.999 | D | 0.736 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.