Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8005 | 24238;24239;24240 | chr2:178719377;178719376;178719375 | chr2:179584104;179584103;179584102 |
N2AB | 7688 | 23287;23288;23289 | chr2:178719377;178719376;178719375 | chr2:179584104;179584103;179584102 |
N2A | 6761 | 20506;20507;20508 | chr2:178719377;178719376;178719375 | chr2:179584104;179584103;179584102 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | rs757042397 | -0.761 | 0.998 | N | 0.545 | 0.251 | None | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 2.66E-05 | 0 |
E/Q | rs757042397 | -0.761 | 0.998 | N | 0.545 | 0.251 | None | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/Q | rs757042397 | -0.761 | 0.998 | N | 0.545 | 0.251 | None | gnomAD-4.0.0 | 2.97473E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.98397E-05 | 0 | 1.60113E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2534 | likely_benign | 0.3132 | benign | -0.885 | Destabilizing | 0.835 | D | 0.502 | neutral | N | 0.500571489 | None | None | N |
E/C | 0.9351 | likely_pathogenic | 0.9585 | pathogenic | -0.548 | Destabilizing | 0.351 | N | 0.517 | neutral | None | None | None | None | N |
E/D | 0.2042 | likely_benign | 0.253 | benign | -1.195 | Destabilizing | 0.98 | D | 0.431 | neutral | N | 0.496869457 | None | None | N |
E/F | 0.8742 | likely_pathogenic | 0.9168 | pathogenic | -0.298 | Destabilizing | 0.999 | D | 0.722 | prob.delet. | None | None | None | None | N |
E/G | 0.3093 | likely_benign | 0.3837 | ambiguous | -1.26 | Destabilizing | 0.071 | N | 0.445 | neutral | D | 0.52217169 | None | None | N |
E/H | 0.6141 | likely_pathogenic | 0.6791 | pathogenic | -0.595 | Destabilizing | 1.0 | D | 0.566 | neutral | None | None | None | None | N |
E/I | 0.5737 | likely_pathogenic | 0.6917 | pathogenic | 0.143 | Stabilizing | 0.996 | D | 0.714 | prob.delet. | None | None | None | None | N |
E/K | 0.3646 | ambiguous | 0.4139 | ambiguous | -0.792 | Destabilizing | 0.98 | D | 0.472 | neutral | N | 0.514761785 | None | None | N |
E/L | 0.6111 | likely_pathogenic | 0.7327 | pathogenic | 0.143 | Stabilizing | 0.991 | D | 0.642 | neutral | None | None | None | None | N |
E/M | 0.6664 | likely_pathogenic | 0.7566 | pathogenic | 0.582 | Stabilizing | 1.0 | D | 0.7 | prob.neutral | None | None | None | None | N |
E/N | 0.4026 | ambiguous | 0.4882 | ambiguous | -1.257 | Destabilizing | 0.996 | D | 0.521 | neutral | None | None | None | None | N |
E/P | 0.9182 | likely_pathogenic | 0.94 | pathogenic | -0.178 | Destabilizing | 0.999 | D | 0.669 | neutral | None | None | None | None | N |
E/Q | 0.1759 | likely_benign | 0.2008 | benign | -1.107 | Destabilizing | 0.998 | D | 0.545 | neutral | N | 0.511606837 | None | None | N |
E/R | 0.4883 | ambiguous | 0.5544 | ambiguous | -0.488 | Destabilizing | 0.999 | D | 0.556 | neutral | None | None | None | None | N |
E/S | 0.2816 | likely_benign | 0.3345 | benign | -1.574 | Destabilizing | 0.97 | D | 0.403 | neutral | None | None | None | None | N |
E/T | 0.3465 | ambiguous | 0.4201 | ambiguous | -1.265 | Destabilizing | 0.996 | D | 0.616 | neutral | None | None | None | None | N |
E/V | 0.3527 | ambiguous | 0.4495 | ambiguous | -0.178 | Destabilizing | 0.989 | D | 0.625 | neutral | N | 0.495927134 | None | None | N |
E/W | 0.9568 | likely_pathogenic | 0.9727 | pathogenic | -0.061 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | N |
E/Y | 0.7902 | likely_pathogenic | 0.856 | pathogenic | -0.062 | Destabilizing | 0.999 | D | 0.708 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.