Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8009 | 24250;24251;24252 | chr2:178719365;178719364;178719363 | chr2:179584092;179584091;179584090 |
N2AB | 7692 | 23299;23300;23301 | chr2:178719365;178719364;178719363 | chr2:179584092;179584091;179584090 |
N2A | 6765 | 20518;20519;20520 | chr2:178719365;178719364;178719363 | chr2:179584092;179584091;179584090 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | rs759900757 | -0.743 | 0.781 | N | 0.636 | 0.428 | 0.758948374077 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
S/F | rs759900757 | -0.743 | 0.781 | N | 0.636 | 0.428 | 0.758948374077 | gnomAD-4.0.0 | 1.11389E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.71507E-05 | 0 | 3.02407E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0664 | likely_benign | 0.062 | benign | -0.448 | Destabilizing | 0.001 | N | 0.159 | neutral | N | 0.491327565 | None | None | I |
S/C | 0.1468 | likely_benign | 0.151 | benign | -0.331 | Destabilizing | 0.931 | D | 0.563 | neutral | N | 0.503902851 | None | None | I |
S/D | 0.609 | likely_pathogenic | 0.6419 | pathogenic | 0.497 | Stabilizing | 0.7 | D | 0.493 | neutral | None | None | None | None | I |
S/E | 0.6357 | likely_pathogenic | 0.647 | pathogenic | 0.445 | Stabilizing | 0.399 | N | 0.473 | neutral | None | None | None | None | I |
S/F | 0.1792 | likely_benign | 0.1766 | benign | -0.882 | Destabilizing | 0.781 | D | 0.636 | neutral | N | 0.488912468 | None | None | I |
S/G | 0.1416 | likely_benign | 0.1452 | benign | -0.619 | Destabilizing | 0.121 | N | 0.437 | neutral | None | None | None | None | I |
S/H | 0.4542 | ambiguous | 0.4697 | ambiguous | -1.069 | Destabilizing | 0.982 | D | 0.564 | neutral | None | None | None | None | I |
S/I | 0.2362 | likely_benign | 0.2241 | benign | -0.12 | Destabilizing | 0.7 | D | 0.631 | neutral | None | None | None | None | I |
S/K | 0.7974 | likely_pathogenic | 0.7955 | pathogenic | -0.347 | Destabilizing | 0.399 | N | 0.471 | neutral | None | None | None | None | I |
S/L | 0.1028 | likely_benign | 0.0994 | benign | -0.12 | Destabilizing | 0.25 | N | 0.511 | neutral | None | None | None | None | I |
S/M | 0.2223 | likely_benign | 0.216 | benign | 0.018 | Stabilizing | 0.947 | D | 0.565 | neutral | None | None | None | None | I |
S/N | 0.2886 | likely_benign | 0.3072 | benign | -0.183 | Destabilizing | 0.826 | D | 0.508 | neutral | None | None | None | None | I |
S/P | 0.8341 | likely_pathogenic | 0.8378 | pathogenic | -0.198 | Destabilizing | 0.638 | D | 0.595 | neutral | N | 0.501256278 | None | None | I |
S/Q | 0.6016 | likely_pathogenic | 0.6011 | pathogenic | -0.345 | Destabilizing | 0.826 | D | 0.554 | neutral | None | None | None | None | I |
S/R | 0.7107 | likely_pathogenic | 0.7008 | pathogenic | -0.247 | Destabilizing | 0.7 | D | 0.602 | neutral | None | None | None | None | I |
S/T | 0.1046 | likely_benign | 0.0995 | benign | -0.298 | Destabilizing | 0.201 | N | 0.406 | neutral | N | 0.457060276 | None | None | I |
S/V | 0.2059 | likely_benign | 0.1933 | benign | -0.198 | Destabilizing | 0.25 | N | 0.509 | neutral | None | None | None | None | I |
S/W | 0.3347 | likely_benign | 0.3391 | benign | -0.866 | Destabilizing | 0.982 | D | 0.654 | neutral | None | None | None | None | I |
S/Y | 0.185 | likely_benign | 0.181 | benign | -0.574 | Destabilizing | 0.781 | D | 0.625 | neutral | D | 0.523960058 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.