Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8020 | 24283;24284;24285 | chr2:178719332;178719331;178719330 | chr2:179584059;179584058;179584057 |
N2AB | 7703 | 23332;23333;23334 | chr2:178719332;178719331;178719330 | chr2:179584059;179584058;179584057 |
N2A | 6776 | 20551;20552;20553 | chr2:178719332;178719331;178719330 | chr2:179584059;179584058;179584057 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/R | None | None | 0.012 | N | 0.421 | 0.207 | 0.0297737177859 | gnomAD-4.0.0 | 1.59125E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85843E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.2839 | likely_benign | 0.2874 | benign | -0.865 | Destabilizing | 0.031 | N | 0.42 | neutral | None | None | None | None | N |
Q/C | 0.406 | ambiguous | 0.3894 | ambiguous | -0.248 | Destabilizing | 0.864 | D | 0.665 | neutral | None | None | None | None | N |
Q/D | 0.6186 | likely_pathogenic | 0.6234 | pathogenic | -0.959 | Destabilizing | 0.136 | N | 0.459 | neutral | None | None | None | None | N |
Q/E | 0.1255 | likely_benign | 0.1306 | benign | -0.826 | Destabilizing | 0.024 | N | 0.393 | neutral | N | 0.465019958 | None | None | N |
Q/F | 0.474 | ambiguous | 0.481 | ambiguous | -0.693 | Destabilizing | 0.038 | N | 0.64 | neutral | None | None | None | None | N |
Q/G | 0.3419 | ambiguous | 0.3571 | ambiguous | -1.234 | Destabilizing | 0.136 | N | 0.543 | neutral | None | None | None | None | N |
Q/H | 0.1229 | likely_benign | 0.1248 | benign | -1.169 | Destabilizing | None | N | 0.333 | neutral | N | 0.33189797 | None | None | N |
Q/I | 0.3155 | likely_benign | 0.3054 | benign | 0.092 | Stabilizing | 0.038 | N | 0.581 | neutral | None | None | None | None | N |
Q/K | 0.0696 | likely_benign | 0.0711 | benign | -0.31 | Destabilizing | None | N | 0.127 | neutral | N | 0.247137572 | None | None | N |
Q/L | 0.0994 | likely_benign | 0.098 | benign | 0.092 | Stabilizing | None | N | 0.389 | neutral | N | 0.385441667 | None | None | N |
Q/M | 0.3368 | likely_benign | 0.3244 | benign | 0.617 | Stabilizing | 0.12 | N | 0.549 | neutral | None | None | None | None | N |
Q/N | 0.4261 | ambiguous | 0.4274 | ambiguous | -0.997 | Destabilizing | 0.072 | N | 0.463 | neutral | None | None | None | None | N |
Q/P | 0.4762 | ambiguous | 0.5283 | ambiguous | -0.196 | Destabilizing | 0.266 | N | 0.611 | neutral | N | 0.483779077 | None | None | N |
Q/R | 0.0582 | likely_benign | 0.0618 | benign | -0.323 | Destabilizing | 0.012 | N | 0.421 | neutral | N | 0.346536562 | None | None | N |
Q/S | 0.3426 | ambiguous | 0.3485 | ambiguous | -1.133 | Destabilizing | 0.031 | N | 0.408 | neutral | None | None | None | None | N |
Q/T | 0.3178 | likely_benign | 0.3194 | benign | -0.795 | Destabilizing | 0.072 | N | 0.521 | neutral | None | None | None | None | N |
Q/V | 0.2519 | likely_benign | 0.2478 | benign | -0.196 | Destabilizing | 0.016 | N | 0.475 | neutral | None | None | None | None | N |
Q/W | 0.3007 | likely_benign | 0.311 | benign | -0.571 | Destabilizing | 0.676 | D | 0.635 | neutral | None | None | None | None | N |
Q/Y | 0.3037 | likely_benign | 0.3143 | benign | -0.29 | Destabilizing | None | N | 0.345 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.