Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8023 | 24292;24293;24294 | chr2:178719323;178719322;178719321 | chr2:179584050;179584049;179584048 |
N2AB | 7706 | 23341;23342;23343 | chr2:178719323;178719322;178719321 | chr2:179584050;179584049;179584048 |
N2A | 6779 | 20560;20561;20562 | chr2:178719323;178719322;178719321 | chr2:179584050;179584049;179584048 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | rs757931022 | 0.34 | 0.007 | N | 0.155 | 0.152 | 0.0611884634855 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
N/K | rs757931022 | 0.34 | 0.007 | N | 0.155 | 0.152 | 0.0611884634855 | gnomAD-4.0.0 | 2.73875E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.601E-06 | 0 | 0 |
N/S | rs779375050 | -0.124 | 0.007 | N | 0.137 | 0.074 | 0.130388298395 | gnomAD-2.1.1 | 8.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 8.88E-06 | 0 |
N/S | rs779375050 | -0.124 | 0.007 | N | 0.137 | 0.074 | 0.130388298395 | gnomAD-4.0.0 | 1.59124E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43275E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1285 | likely_benign | 0.141 | benign | -0.354 | Destabilizing | 0.129 | N | 0.331 | neutral | None | None | None | None | N |
N/C | 0.1706 | likely_benign | 0.1734 | benign | 0.256 | Stabilizing | 0.983 | D | 0.345 | neutral | None | None | None | None | N |
N/D | 0.1007 | likely_benign | 0.1108 | benign | 0.225 | Stabilizing | 0.002 | N | 0.139 | neutral | N | 0.48688175 | None | None | N |
N/E | 0.1422 | likely_benign | 0.1619 | benign | 0.198 | Stabilizing | 0.01 | N | 0.143 | neutral | None | None | None | None | N |
N/F | 0.2525 | likely_benign | 0.2863 | benign | -0.72 | Destabilizing | 0.836 | D | 0.371 | neutral | None | None | None | None | N |
N/G | 0.1887 | likely_benign | 0.2059 | benign | -0.531 | Destabilizing | 0.129 | N | 0.22 | neutral | None | None | None | None | N |
N/H | 0.0681 | likely_benign | 0.0705 | benign | -0.508 | Destabilizing | 0.794 | D | 0.3 | neutral | N | 0.493866438 | None | None | N |
N/I | 0.1007 | likely_benign | 0.106 | benign | 0.025 | Stabilizing | 0.213 | N | 0.389 | neutral | N | 0.463428888 | None | None | N |
N/K | 0.0872 | likely_benign | 0.0959 | benign | 0.08 | Stabilizing | 0.007 | N | 0.155 | neutral | N | 0.398875977 | None | None | N |
N/L | 0.1237 | likely_benign | 0.1374 | benign | 0.025 | Stabilizing | 0.129 | N | 0.355 | neutral | None | None | None | None | N |
N/M | 0.1675 | likely_benign | 0.1785 | benign | 0.249 | Stabilizing | 0.836 | D | 0.355 | neutral | None | None | None | None | N |
N/P | 0.6663 | likely_pathogenic | 0.704 | pathogenic | -0.075 | Destabilizing | 0.593 | D | 0.387 | neutral | None | None | None | None | N |
N/Q | 0.1261 | likely_benign | 0.1365 | benign | -0.372 | Destabilizing | 0.418 | N | 0.245 | neutral | None | None | None | None | N |
N/R | 0.0992 | likely_benign | 0.1086 | benign | 0.122 | Stabilizing | 0.264 | N | 0.187 | neutral | None | None | None | None | N |
N/S | 0.0679 | likely_benign | 0.0708 | benign | -0.195 | Destabilizing | 0.007 | N | 0.137 | neutral | N | 0.467773128 | None | None | N |
N/T | 0.0821 | likely_benign | 0.0851 | benign | -0.072 | Destabilizing | 0.003 | N | 0.127 | neutral | N | 0.473605809 | None | None | N |
N/V | 0.1125 | likely_benign | 0.1189 | benign | -0.075 | Destabilizing | 0.01 | N | 0.265 | neutral | None | None | None | None | N |
N/W | 0.4488 | ambiguous | 0.4898 | ambiguous | -0.715 | Destabilizing | 0.983 | D | 0.38 | neutral | None | None | None | None | N |
N/Y | 0.0899 | likely_benign | 0.0975 | benign | -0.444 | Destabilizing | 0.921 | D | 0.36 | neutral | N | 0.508758532 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.