Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8024 | 24295;24296;24297 | chr2:178719320;178719319;178719318 | chr2:179584047;179584046;179584045 |
N2AB | 7707 | 23344;23345;23346 | chr2:178719320;178719319;178719318 | chr2:179584047;179584046;179584045 |
N2A | 6780 | 20563;20564;20565 | chr2:178719320;178719319;178719318 | chr2:179584047;179584046;179584045 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | None | None | 0.939 | N | 0.548 | 0.216 | 0.28722502521 | gnomAD-4.0.0 | 8.40225E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 6.56251E-06 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1413 | likely_benign | 0.157 | benign | -0.589 | Destabilizing | 0.939 | D | 0.581 | neutral | N | 0.487302626 | None | None | N |
E/C | 0.7915 | likely_pathogenic | 0.829 | pathogenic | -0.387 | Destabilizing | 0.999 | D | 0.707 | prob.neutral | None | None | None | None | N |
E/D | 0.1752 | likely_benign | 0.2094 | benign | -0.497 | Destabilizing | 0.939 | D | 0.503 | neutral | N | 0.489820613 | None | None | N |
E/F | 0.6911 | likely_pathogenic | 0.7294 | pathogenic | -0.089 | Destabilizing | 0.999 | D | 0.674 | neutral | None | None | None | None | N |
E/G | 0.1613 | likely_benign | 0.1834 | benign | -0.844 | Destabilizing | 0.982 | D | 0.553 | neutral | N | 0.512448 | None | None | N |
E/H | 0.3399 | likely_benign | 0.4016 | ambiguous | 0.222 | Stabilizing | 0.999 | D | 0.615 | neutral | None | None | None | None | N |
E/I | 0.2984 | likely_benign | 0.3283 | benign | 0.077 | Stabilizing | 0.993 | D | 0.696 | prob.neutral | None | None | None | None | N |
E/K | 0.0744 | likely_benign | 0.0842 | benign | 0.095 | Stabilizing | 0.046 | N | 0.253 | neutral | N | 0.517396658 | None | None | N |
E/L | 0.3149 | likely_benign | 0.3488 | ambiguous | 0.077 | Stabilizing | 0.986 | D | 0.628 | neutral | None | None | None | None | N |
E/M | 0.3452 | ambiguous | 0.372 | ambiguous | 0.092 | Stabilizing | 0.999 | D | 0.631 | neutral | None | None | None | None | N |
E/N | 0.2518 | likely_benign | 0.3077 | benign | -0.518 | Destabilizing | 0.986 | D | 0.616 | neutral | None | None | None | None | N |
E/P | 0.3063 | likely_benign | 0.357 | ambiguous | -0.125 | Destabilizing | 0.993 | D | 0.675 | neutral | None | None | None | None | N |
E/Q | 0.104 | likely_benign | 0.114 | benign | -0.422 | Destabilizing | 0.939 | D | 0.548 | neutral | N | 0.519071527 | None | None | N |
E/R | 0.1346 | likely_benign | 0.1504 | benign | 0.478 | Stabilizing | 0.91 | D | 0.587 | neutral | None | None | None | None | N |
E/S | 0.1948 | likely_benign | 0.2291 | benign | -0.668 | Destabilizing | 0.953 | D | 0.577 | neutral | None | None | None | None | N |
E/T | 0.2031 | likely_benign | 0.235 | benign | -0.445 | Destabilizing | 0.986 | D | 0.609 | neutral | None | None | None | None | N |
E/V | 0.1894 | likely_benign | 0.2043 | benign | -0.125 | Destabilizing | 0.991 | D | 0.611 | neutral | D | 0.533944978 | None | None | N |
E/W | 0.8333 | likely_pathogenic | 0.864 | pathogenic | 0.193 | Stabilizing | 0.999 | D | 0.708 | prob.delet. | None | None | None | None | N |
E/Y | 0.4982 | ambiguous | 0.5661 | pathogenic | 0.18 | Stabilizing | 0.998 | D | 0.652 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.