Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8026 | 24301;24302;24303 | chr2:178719314;178719313;178719312 | chr2:179584041;179584040;179584039 |
N2AB | 7709 | 23350;23351;23352 | chr2:178719314;178719313;178719312 | chr2:179584041;179584040;179584039 |
N2A | 6782 | 20569;20570;20571 | chr2:178719314;178719313;178719312 | chr2:179584041;179584040;179584039 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/D | None | None | 0.055 | N | 0.411 | 0.207 | 0.650414729863 | gnomAD-4.0.0 | 1.3684E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.51915E-05 | None | 0 | 0 | 0 | 1.15931E-05 | 0 |
V/G | None | None | 0.055 | N | 0.415 | 0.205 | 0.667366933581 | gnomAD-4.0.0 | 6.84201E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99478E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.0932 | likely_benign | 0.0972 | benign | -0.358 | Destabilizing | 0.012 | N | 0.213 | neutral | N | 0.441050673 | None | None | N |
V/C | 0.4424 | ambiguous | 0.4739 | ambiguous | -0.804 | Destabilizing | 0.864 | D | 0.333 | neutral | None | None | None | None | N |
V/D | 0.1506 | likely_benign | 0.1643 | benign | -0.262 | Destabilizing | 0.055 | N | 0.411 | neutral | N | 0.46633312 | None | None | N |
V/E | 0.1443 | likely_benign | 0.1637 | benign | -0.377 | Destabilizing | 0.038 | N | 0.395 | neutral | None | None | None | None | N |
V/F | 0.0799 | likely_benign | 0.0821 | benign | -0.717 | Destabilizing | None | N | 0.187 | neutral | N | 0.496829385 | None | None | N |
V/G | 0.1076 | likely_benign | 0.1176 | benign | -0.419 | Destabilizing | 0.055 | N | 0.415 | neutral | N | 0.472605731 | None | None | N |
V/H | 0.2166 | likely_benign | 0.2439 | benign | -0.034 | Destabilizing | 0.001 | N | 0.321 | neutral | None | None | None | None | N |
V/I | 0.0686 | likely_benign | 0.0668 | benign | -0.339 | Destabilizing | None | N | 0.198 | neutral | N | 0.466853195 | None | None | N |
V/K | 0.1383 | likely_benign | 0.1574 | benign | -0.379 | Destabilizing | 0.038 | N | 0.373 | neutral | None | None | None | None | N |
V/L | 0.0886 | likely_benign | 0.0959 | benign | -0.339 | Destabilizing | 0.004 | N | 0.201 | neutral | N | 0.453481253 | None | None | N |
V/M | 0.0965 | likely_benign | 0.1062 | benign | -0.565 | Destabilizing | 0.214 | N | 0.302 | neutral | None | None | None | None | N |
V/N | 0.1146 | likely_benign | 0.1255 | benign | -0.19 | Destabilizing | 0.072 | N | 0.39 | neutral | None | None | None | None | N |
V/P | 0.1682 | likely_benign | 0.1882 | benign | -0.317 | Destabilizing | 0.356 | N | 0.372 | neutral | None | None | None | None | N |
V/Q | 0.1422 | likely_benign | 0.1621 | benign | -0.388 | Destabilizing | 0.007 | N | 0.267 | neutral | None | None | None | None | N |
V/R | 0.1174 | likely_benign | 0.1254 | benign | 0.051 | Stabilizing | 0.214 | N | 0.401 | neutral | None | None | None | None | N |
V/S | 0.0907 | likely_benign | 0.0979 | benign | -0.51 | Destabilizing | 0.003 | N | 0.283 | neutral | None | None | None | None | N |
V/T | 0.0974 | likely_benign | 0.1034 | benign | -0.531 | Destabilizing | 0.038 | N | 0.192 | neutral | None | None | None | None | N |
V/W | 0.4609 | ambiguous | 0.4847 | ambiguous | -0.773 | Destabilizing | 0.864 | D | 0.363 | neutral | None | None | None | None | N |
V/Y | 0.2451 | likely_benign | 0.2545 | benign | -0.502 | Destabilizing | 0.038 | N | 0.38 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.