Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8033 | 24322;24323;24324 | chr2:178719293;178719292;178719291 | chr2:179584020;179584019;179584018 |
N2AB | 7716 | 23371;23372;23373 | chr2:178719293;178719292;178719291 | chr2:179584020;179584019;179584018 |
N2A | 6789 | 20590;20591;20592 | chr2:178719293;178719292;178719291 | chr2:179584020;179584019;179584018 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/Y | None | None | 0.213 | N | 0.589 | 0.271 | 0.513112959101 | gnomAD-4.0.0 | 1.59121E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43271E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0691 | likely_benign | 0.0727 | benign | -1.046 | Destabilizing | 0.047 | N | 0.259 | neutral | N | 0.426756011 | None | None | I |
S/C | 0.1037 | likely_benign | 0.0994 | benign | -0.622 | Destabilizing | 0.004 | N | 0.307 | neutral | N | 0.465583758 | None | None | I |
S/D | 0.3072 | likely_benign | 0.3426 | ambiguous | 0.012 | Stabilizing | 0.593 | D | 0.34 | neutral | None | None | None | None | I |
S/E | 0.3427 | ambiguous | 0.394 | ambiguous | -0.008 | Destabilizing | 0.418 | N | 0.341 | neutral | None | None | None | None | I |
S/F | 0.1354 | likely_benign | 0.141 | benign | -1.451 | Destabilizing | 0.001 | N | 0.339 | neutral | N | 0.39406759 | None | None | I |
S/G | 0.0951 | likely_benign | 0.0949 | benign | -1.246 | Destabilizing | 0.228 | N | 0.341 | neutral | None | None | None | None | I |
S/H | 0.1984 | likely_benign | 0.2239 | benign | -1.736 | Destabilizing | 0.94 | D | 0.523 | neutral | None | None | None | None | I |
S/I | 0.1073 | likely_benign | 0.1086 | benign | -0.614 | Destabilizing | 0.001 | N | 0.319 | neutral | None | None | None | None | I |
S/K | 0.3738 | ambiguous | 0.4218 | ambiguous | -0.596 | Destabilizing | 0.418 | N | 0.344 | neutral | None | None | None | None | I |
S/L | 0.0802 | likely_benign | 0.0838 | benign | -0.614 | Destabilizing | 0.061 | N | 0.352 | neutral | None | None | None | None | I |
S/M | 0.167 | likely_benign | 0.1735 | benign | -0.207 | Destabilizing | 0.716 | D | 0.521 | neutral | None | None | None | None | I |
S/N | 0.1162 | likely_benign | 0.1196 | benign | -0.501 | Destabilizing | 0.593 | D | 0.429 | neutral | None | None | None | None | I |
S/P | 0.0969 | likely_benign | 0.1305 | benign | -0.728 | Destabilizing | 0.002 | N | 0.303 | neutral | N | 0.454713404 | None | None | I |
S/Q | 0.2993 | likely_benign | 0.3533 | ambiguous | -0.69 | Destabilizing | 0.836 | D | 0.445 | neutral | None | None | None | None | I |
S/R | 0.2982 | likely_benign | 0.3358 | benign | -0.505 | Destabilizing | 0.836 | D | 0.572 | neutral | None | None | None | None | I |
S/T | 0.0752 | likely_benign | 0.0781 | benign | -0.615 | Destabilizing | 0.183 | N | 0.339 | neutral | N | 0.386064182 | None | None | I |
S/V | 0.1135 | likely_benign | 0.1203 | benign | -0.728 | Destabilizing | 0.001 | N | 0.351 | neutral | None | None | None | None | I |
S/W | 0.2157 | likely_benign | 0.2324 | benign | -1.341 | Destabilizing | 0.983 | D | 0.543 | neutral | None | None | None | None | I |
S/Y | 0.1018 | likely_benign | 0.1041 | benign | -1.098 | Destabilizing | 0.213 | N | 0.589 | neutral | N | 0.441629463 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.