Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8034 | 24325;24326;24327 | chr2:178719290;178719289;178719288 | chr2:179584017;179584016;179584015 |
N2AB | 7717 | 23374;23375;23376 | chr2:178719290;178719289;178719288 | chr2:179584017;179584016;179584015 |
N2A | 6790 | 20593;20594;20595 | chr2:178719290;178719289;178719288 | chr2:179584017;179584016;179584015 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/T | None | None | None | N | 0.093 | 0.151 | 0.163833314356 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0814 | likely_benign | 0.0824 | benign | -0.683 | Destabilizing | None | N | 0.11 | neutral | None | None | None | None | N |
S/C | 0.1142 | likely_benign | 0.1145 | benign | -0.379 | Destabilizing | 0.851 | D | 0.359 | neutral | D | 0.527336251 | None | None | N |
S/D | 0.2297 | likely_benign | 0.2628 | benign | 0.223 | Stabilizing | 0.22 | N | 0.223 | neutral | None | None | None | None | N |
S/E | 0.3275 | likely_benign | 0.3688 | ambiguous | 0.168 | Stabilizing | 0.055 | N | 0.239 | neutral | None | None | None | None | N |
S/F | 0.1352 | likely_benign | 0.1283 | benign | -1.154 | Destabilizing | 0.497 | N | 0.439 | neutral | None | None | None | None | N |
S/G | 0.082 | likely_benign | 0.0968 | benign | -0.853 | Destabilizing | 0.042 | N | 0.232 | neutral | N | 0.501888162 | None | None | N |
S/H | 0.1815 | likely_benign | 0.1971 | benign | -1.352 | Destabilizing | 0.667 | D | 0.377 | neutral | None | None | None | None | N |
S/I | 0.1037 | likely_benign | 0.1065 | benign | -0.355 | Destabilizing | 0.096 | N | 0.413 | neutral | D | 0.531520749 | None | None | N |
S/K | 0.3699 | ambiguous | 0.4024 | ambiguous | -0.504 | Destabilizing | 0.001 | N | 0.106 | neutral | None | None | None | None | N |
S/L | 0.0931 | likely_benign | 0.0909 | benign | -0.355 | Destabilizing | 0.001 | N | 0.268 | neutral | None | None | None | None | N |
S/M | 0.1725 | likely_benign | 0.1811 | benign | -0.052 | Destabilizing | 0.497 | N | 0.391 | neutral | None | None | None | None | N |
S/N | 0.1012 | likely_benign | 0.109 | benign | -0.324 | Destabilizing | 0.175 | N | 0.253 | neutral | N | 0.488783883 | None | None | N |
S/P | 0.5288 | ambiguous | 0.5545 | ambiguous | -0.434 | Destabilizing | 0.364 | N | 0.412 | neutral | None | None | None | None | N |
S/Q | 0.3022 | likely_benign | 0.3362 | benign | -0.518 | Destabilizing | 0.124 | N | 0.304 | neutral | None | None | None | None | N |
S/R | 0.2798 | likely_benign | 0.2988 | benign | -0.368 | Destabilizing | None | N | 0.153 | neutral | D | 0.526362858 | None | None | N |
S/T | 0.0696 | likely_benign | 0.0697 | benign | -0.425 | Destabilizing | None | N | 0.093 | neutral | N | 0.448478078 | None | None | N |
S/V | 0.1158 | likely_benign | 0.1193 | benign | -0.434 | Destabilizing | 0.055 | N | 0.395 | neutral | None | None | None | None | N |
S/W | 0.2404 | likely_benign | 0.2451 | benign | -1.109 | Destabilizing | 0.958 | D | 0.45 | neutral | None | None | None | None | N |
S/Y | 0.1283 | likely_benign | 0.1245 | benign | -0.845 | Destabilizing | 0.859 | D | 0.442 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.